The University of Texas MD Anderson Cancer Center

  • United States

Research Output 1906 2019

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Conference contribution
2018

A comparative study on the generalization ability of back propagation neural network and support vector machine for tracking tumor motion in radiotherapy

Shan, G., Zhang, J., Ge, Y. & Chen, M., Sep 19 2018, 2018 2nd International Conference on Biomedical Engineering and Bioinformatics, ICBEB 2018. Association for Computing Machinery, p. 85-88 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Radiotherapy
Backpropagation
Support vector machines
Tumors
Neural networks

A label-fusion-aided convolutional neural network for isointense infant brain tissue segmentation

Li, T., Zhou, F., Zhu, Z., Shu, H. & Zhu, H., May 23 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society, Vol. 2018-April. p. 692-695 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Labels
Brain
Fusion reactions
Tissue
Neural networks

Analysis-synthesis model learning with shared features: A new framework for histopathological image classification

Li, X., Monga, V. & Rao, U. K. A., May 23 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society, Vol. 2018-April. p. 203-206 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Image classification
Learning
Glossaries
Databases
Image analysis

Assessment of blood oxygen saturation using spectroscopic photoacoustic imaging as a biomarker for disease progression in a small-animal leukemia model

Wood, C., Harutyunyan, K., De La Cerda, J., Kaffes, C., Millward, N. M. Z., Shanmugavelandy, S., Konopleva, M. & Bouchard, R. R., Jan 1 2018, Medical Imaging 2018: Ultrasonic Imaging and Tomography. Duric, N. & Byram, B. C. (eds.). SPIE, Vol. 10580. 105800W

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Experimental Leukemias
leukemias
Photoacoustic effect
biomarkers
Biomarkers

Automated algorithms for improved pre-processing of magnetic relaxometry data

Stefan, W., Mathieu, K. B., Thrower, S. L., Fuentes, D. T. A., Kaffes, C., Sovizi, J. & Hazle, J. D., Jan 1 2018, Medical Imaging 2018: Physics of Medical Imaging. Schmidt, T. G., Chen, G-H. & Lo, J. Y. (eds.). SPIE, Vol. 10573. 105733R

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Magnetic relaxation
magnetic relaxation
preprocessing
estimates
Processing

Bayesian classifiers of solid lesions with dynamic CT: Integrating enhancement density with washout density and delay interval

Chen, N., Ng, C. S. & Hobbs, B. P., May 23 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society, Vol. 2018-April. p. 236-239 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Classifiers
Statistics
Unsupervised learning
Pathology
Regression analysis

Bayesian inference and model selection for physiologically-based pharmacokinetic modeling of superparamagnetic iron oxide nanoparticles

Bi, L., Sovizi, J., Mathieu, K. B., Stefan, W., Thrower, S., Hazle, J. D. & Fuentes, D. T. A., Jan 1 2018, Medical Imaging 2018: Biomedical Applications in Molecular, Structural, and Functional Imaging. Gimi, B. & Krol, A. (eds.). SPIE, Vol. 10578. 105782G

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Pharmacokinetics
Iron oxides
inference
iron oxides
Nanoparticles
1 Citations (Scopus)

Body surface detection method for photoacoustic image data using cloth-simulation technique

Sekiguchi, H., Yoshikawa, A., Matsumoto, Y., Asao, Y., Yagi, T., Togashi, K. & Toi, M., Jan 1 2018, Photons Plus Ultrasound: Imaging and Sensing 2018. Wang, L. V. & Oraevsky, A. A. (eds.). SPIE, Vol. 10494. 1049459

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Photoacoustic effect
Blood vessels
blood vessels
Tomography
Blood Vessels
4 Citations (Scopus)

Brain tumor segmentation and radiomics survival prediction: Contribution to the BRATS 2017 challenge

Isensee, F., Kickingereder, P., Wick, W., Bendszus, M. & Maier-Hein, K. H., Jan 1 2018, Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries - 3rd International Workshop, BrainLes 2017, Held in Conjunction with MICCAI 2017, Revised Selected Papers. Menze, B., Crimi, A., Kuijf, H., Reyes, M. & Bakas, S. (eds.). Springer Verlag, p. 287-297 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10670 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Brain Tumor
Tumors
Tumor
Brain
Dice

Breast cancer Ki67 expression preoperative discrimination by DCE-MRI radiomics features

Ma, W., Ji, Y., Qin, Z., Guo, X., Jian, X. & Liu, P., Jan 1 2018, Multimodal Biomedical Imaging XIII. Azar, F. S. & Intes, X. (eds.). SPIE, Vol. 10487. 104870N

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Magnetic resonance
breast
magnetic resonance
discrimination
cancer

Can technology improve medication adherence in older people with dementia?

El-Saifi, N., Moyle, W., Jones, C. & Tuffaha, H., Jan 1 2018, Smart Homes and Health Telematics, Designing a Better Future: Urban Assisted Living - 16th International Conference, ICOST 2018, Proceedings. Springer Verlag, p. 3-10 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10898 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Dementia
Costs

Cell image segmentation by integrating multiple CNNs

Hiramatsu, Y., Hotta, K., Imanishi, A., Matsuda, M. & Terai, K., Dec 13 2018, Proceedings - 2018 IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops, CVPRW 2018. IEEE Computer Society, Vol. 2018-June. p. 2286-2292 7 p. 8575468

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Image segmentation
Semantics
Cytology
Cell membranes
Medicine

Clinical applications of optical and optoacoustic imaging techniques in the breast

Yang, W. T., Jan 1 2018, Medical Imaging 2018: Physics of Medical Imaging. Schmidt, T. G., Chen, G-H. & Lo, J. Y. (eds.). SPIE, Vol. 10573. 105730V

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Photoacoustic Techniques
Photoacoustic effect
Optical Imaging
imaging techniques
breast

Deep 3D dose analysis for prediction of outcomes after liver stereotactic body radiation therapy

Ibragimov, B., Toesca, D. A. S., Yuan, Y., Koong, A., Chang, D. T. & Xing, L., Jan 1 2018, Medical Image Computing and Computer Assisted Intervention – MICCAI 2018 - 21st International Conference, 2018, Proceedings. Fichtinger, G., Davatzikos, C., Alberola-López, C., Frangi, A. F. & Schnabel, J. A. (eds.). Springer Verlag, p. 684-692 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11071 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Radiation Therapy
Radiotherapy
Liver
Dose
Prediction

Densely Deep Supervised Networks with Threshold Loss for Cancer Detection in Automated Breast Ultrasound

Wang, N., Bian, C., Wang, Y., Xu, M., Qin, C., Yang, X., Wang, T., Li, A-H., Shen, D. & Ni, D., Jan 1 2018, Medical Image Computing and Computer Assisted Intervention – MICCAI 2018 - 21st International Conference, 2018, Proceedings. Frangi, A. F., Fichtinger, G., Schnabel, J. A., Alberola-López, C. & Davatzikos, C. (eds.). Springer Verlag, p. 641-648 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11073 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Ultrasound
Cancer
Ultrasonics
Breast Cancer
Entropy Loss

Determination of the limit of detection for iodinated contrast agents with multi-energy computed tomography

Jacobsen, M. C., Duan, X., Cody, D., Cressman, E. N. K., Schellingerhout, D. & Layman, R. R., Jan 1 2018, Medical Imaging 2018: Physics of Medical Imaging. Schmidt, T. G., Chen, G-H. & Lo, J. Y. (eds.). SPIE, Vol. 10573. 105734Q

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Iodine
Contrast Media
iodine
Tomography
Limit of Detection

Dissecting Privacy Risks in Biomedical Data

Berrang, P., Humbert, M., Zhang, Y., Lehmann, I., Eils, R. & Backes, M., Jul 6 2018, Proceedings - 3rd IEEE European Symposium on Security and Privacy, EURO S and P 2018. Institute of Electrical and Electronics Engineers Inc., p. 62-76 15 p. (Proceedings - 3rd IEEE European Symposium on Security and Privacy, EURO S and P 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Bayesian networks
Methylation
Medicine
Health
Costs

Domain adaptation for deviating acquisition protocols in CNN-based lesion classification on diffusion-weighted MR images

Kamphenkel, J., Jäger, P. F., Bickelhaupt, S., Laun, F. B., Lederer, W., Daniel, H., Kuder, T. A., Delorme, S., Schlemmer, H-P., König, F. & Maier-Hein, K. H., Jan 1 2018, Image Analysis for Moving Organ, Breast, and Thoracic Images - Third International Workshop, RAMBO 2018, Fourth International Workshop, BIA 2018, and First International Workshop, TIA 2018, Held in Conjunction with MICCAI 2018, Proceedings. Snead, D., Trucco, E., Stoyanov, D., Taylor, Z., Maier-Hein, L., Rajpoot, N., Bogunovic, H., Ciompi, F., Veta, M., Garvin, M. K., Chen, X. J., Martel, A., van der Laak, J., Xu, Y. & McKenna, S. (eds.). Springer Verlag, p. 73-80 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11040 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Neural Networks
Neural networks
Network protocols
Model-based
Cancer Classification

Evaluating local features in high-resolution 3D-PLI data

Ali, S., Axer, M., Amunts, K., Eils, R. & Rohr, K., May 23 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society, Vol. 2018-April. p. 729-733 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Brain
Neuroimaging
Imaging techniques
Light polarization
Light

HL-FCN: Hybrid loss guided FCN for colorectal cancer segmentation

Huang, Y. J., Dou, Q., Wang, Z. X., Liu, L. Z., Wang, L. S., Chen, H., Heng, P. A. & Xu, R-H., May 23 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society, Vol. 2018-April. p. 195-198 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Colorectal Neoplasms
Radiotherapy
Magnetic resonance
Network architecture
Labeling
1 Citations (Scopus)

How to Exploit Weaknesses in Biomedical Challenge Design and Organization

Reinke, A., Eisenmann, M., Onogur, S., Stankovic, M., Scholz, P., Full, P. M., Bogunovic, H., Landman, B. A., Maier, O., Menze, B., Sharp, G. C., Sirinukunwattana, K., Speidel, S., van der Sommen, F., Zheng, G., Müller, H., Kozubek, M., Arbel, T., Bradley, A. P., Jannin, P. & 2 othersKopp-Schneider, A. & Maier-Hein, L., Jan 1 2018, Medical Image Computing and Computer Assisted Intervention – MICCAI 2018 - 21st International Conference, 2018, Proceedings. Frangi, A. F., Fichtinger, G., Schnabel, J. A., Alberola-López, C. & Davatzikos, C. (eds.). Springer Verlag, p. 388-395 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11073 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Benchmarking
Best Practice
Experimental Analysis
Recommendations
Ranking

Imaging biomarker development based on microbubble perfusion and oxygen saturation in a rat model of liver cancer

Naser, M. A., Munoz, N., Sampaio, D. R. T., Taghavi, H., Mitcham, T., Maldonado, K., Kingsley, C., Avritscher, R. & Bouchard, R. R., Jan 1 2018, Medical Imaging 2018: Ultrasonic Imaging and Tomography. Duric, N. & Byram, B. C. (eds.). SPIE, Vol. 10580. 1058007

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Microbubbles
Photoacoustic effect
biomarkers
Biomarkers
Liver Neoplasms

Improvement of liver ablation treatment for colorectal liver metastases

Anderson, B. M., Lin, E. Y., Cazoulat, G., Gupta, S., Odisio, B. C. & Brock, K. K., Jan 1 2018, Medical Imaging 2018: Image-Guided Procedures, Robotic Interventions, and Modeling. Fei, B. & Webster, R. J. (eds.). SPIE, Vol. 10576. 105762D

Research output: Chapter in Book/Report/Conference proceedingConference contribution

metastasis
Ablation
liver
Liver
ablation

Information theory optimization of acquisition parameters for improved synthetic MRI reconstruction

Mitchell, D., Hwang, K-P., Zhang, T. & Fuentes, D. T. A., Jan 1 2018, Medical Imaging 2018: Physics of Medical Imaging. Schmidt, T. G., Chen, G-H. & Lo, J. Y. (eds.). SPIE, Vol. 10573. 105733A

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Information Theory
information theory
Information theory
Magnetic resonance
magnetic resonance

Investigation of the Influence of ECoG Grid Spatial Density on Decoding Hand Flexion and Extension

Jiang, T., Jiang, T., Wang, T., Mei, S., Liu, Q., Li, Y., Wang, X., Prabhu, S. S., Sha, Z. & Ince, N. F., Oct 26 2018, 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2018. Institute of Electrical and Electronics Engineers Inc., p. 3052-3055 4 p. 8513008. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS; vol. 2018-July).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Decoding
Hand
Frequency bands
Brain
Brain-Computer Interfaces

In vivo imaging of radiopaque resorbable inferior vena cava filter infused with gold nanoparticles

Tian, L., Lee, P., Singhana, B., Chen, A., Qiao, Y., Lu, L., Martinez, J., Tasciotti, E., Jacobsen, M. C., Melancon, A. D., McArthur, M. J., Eggers, M., Huang, S. & Melancon, M. P., Jan 1 2018, Medical Imaging 2018: Image-Guided Procedures, Robotic Interventions, and Modeling. Fei, B. & Webster, R. J. (eds.). SPIE, Vol. 10576. 105762S

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Vena Cava Filters
Analysis of variance (ANOVA)
Gold
Nanoparticles
Strength of materials

Mammographic breast density over time among women who have participated in BreastScreen Norway

Moshina, N., Wåde, G. G., Roman, M., Sebuødegård, S. & Hofvind, S., Jan 1 2018, 14th International Workshop on Breast Imaging (IWBI 2018). Krupinski, E. A. (ed.). SPIE, Vol. 10718. 107180C

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Norway
breast
Screening
Breast
screening

Noninvasive autofluorescence imaging for tracking and monitoring the progression of oral premalignant lesions

Cherry, K., Schwarz, R. A., Yang, E., Badaoui, H., Williams, M. D., Vigneswaran, N., Gillenwater, A. M. & Richards-Kortum, R., Jan 1 2018, Clinical and Translational Biophotonics, TRANSLATIONAL 2018. OSA - The Optical Society, Vol. Part F91-TRANSLATIONAL 2018.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Imaging techniques
Monitoring
1 Citations (Scopus)

Organ-specific context-sensitive CT image reconstruction and display

Dorn, S., Chen, S., Sawall, S., Simons, D., May, M., Maier, J., Knaup, M., Schlemmer, H-P., Maier, A., Lell, M. M. & Kachelrieß, M., Jan 1 2018, Medical Imaging 2018: Physics of Medical Imaging. Schmidt, T. G., Chen, G-H. & Lo, J. Y. (eds.). SPIE, Vol. 10573. 1057326

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Computer-Assisted Image Processing
image reconstruction
Image reconstruction
organs
Display devices

Preliminary study of benign and malignant differentiation of small pulmonary nodules in lung CT images by using deep learning convolutional neural network

Ni, Y., Huang, H., Sun, J., Yang, Y., Wang, M., Gu, Y., Li, M., Zhang, G., Li, W. & Zhang, J., Jan 1 2018, Medical Imaging 2018: Imaging Informatics for Healthcare, Research, and Applications. Chen, P-H. & Zhang, J. (eds.). SPIE, Vol. 10579. 1057916

Research output: Chapter in Book/Report/Conference proceedingConference contribution

nodules
lungs
learning
Learning
Neural networks

Quantitative image feature variability amongst CT scanners with a controlled scan protocol

Ger, R. B., Zhou, S., Chi, P. C. M., Goff, D. L., Zhang, L., Lee, H. J., Fuller, C., Howell, R. M., Li, H., Stafford, J., Court, L. E. & Mackin, D. S., Jan 1 2018, Medical Imaging 2018: Computer-Aided Diagnosis. Mori, K. & Petrick, N. (eds.). SPIE, Vol. 10575. 105751O

Research output: Chapter in Book/Report/Conference proceedingConference contribution

X-Ray Computed Tomography Scanners
scanners
Tomography
tomography
cancer

Scale-bundle spline-based non-rigid registration for handling fissures

Ali, S., Amunts, K., Eils, R., Axer, M. & Rohr, K., May 23 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society, Vol. 2018-April. p. 762-765 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Splines
Histology
Temporal Lobe
Light
Brain
1 Citations (Scopus)

Segmentation of cell membrane and nucleus by improving Pix2pix

Sato, M., Hotta, K., Imanishi, A., Matsuda, M. & Terai, K., Jan 1 2018, BIOSIGNALS 2018 - 11th International Conference on Bio-Inspired Systems and Signal Processing, Proceedings; Part of 11th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2018. Gamboa, H., Bermudez i Badia, S., Saggio, G. & Fred, A. (eds.). SciTePress, Vol. 4. p. 216-220 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Discriminators
Cell membranes
Semantics
Experiments
1 Citations (Scopus)

Segmentation of cell membrane and nucleus using branches with different roles in deep neural network

Murata, T., Hotta, K., Imanishi, A., Matsuda, M. & Terai, K., Jan 1 2018, BIOSIGNALS 2018 - 11th International Conference on Bio-Inspired Systems and Signal Processing, Proceedings; Part of 11th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2018. Gamboa, H., Bermudez i Badia, S., Saggio, G. & Fred, A. (eds.). SciTePress, Vol. 4. p. 256-261 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Cell membranes
Convolution
Deep neural networks

Sensitivity and specificity of a sparse reconstruction algorithm for superparamagnetic relaxometry

Thrower, S. L., Fuentes, D. T. A., Stefan, W., Sovizi, J., Mathieu, K. B. & Hazle, J. D., Jan 1 2018, Medical Imaging 2018: Physics of Medical Imaging. Schmidt, T. G., Chen, G-H. & Lo, J. Y. (eds.). SPIE, Vol. 10573. 1057327

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Sensitivity and Specificity
sensitivity
Nanoparticles
Screening
screening

SlicerSALT: Shape AnaLysis Toolbox

Vicory, J., Pascal, L., Hernandez, P., Fishbaugh, J., Prieto, J., Mostapha, M., Huang, C., Shah, H., Hong, J., Liu, Z., Michoud, L., Fillion-Robin, J. C., Gerig, G., Zhu, H., Pizer, S. M., Styner, M. & Paniagua, B., Jan 1 2018, Shape in Medical Imaging - International Workshop, ShapeMI 2018, Held in Conjunction with MICCAI 2018, Proceedings. Lombaert, H., Paniagua, B., Egger, B., Lüthi, M., Reuter, M. & Wachinger, C. (eds.). Springer Verlag, p. 65-72 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11167 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Shape Analysis
Slice
Shape Representation
Open Source
Statistical Analysis

Statistical disease mapping for heterogeneous neuroimaging studies

Liu, R., Huang, C., Li, T., Yang, L. & Zhu, H., May 23 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society, Vol. 2018-April. p. 1415-1418 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Neuroimaging
Genetic Heterogeneity
Autistic Disorder
Statistical methods
Stroke

Stratifying cervical cancer risk with registry data

Baltzer, N., Nygård, M., Sundstrom, K., Dillner, J., Nygard, J. & Komorowski, J., Dec 24 2018, Proceedings - IEEE 14th International Conference on eScience, e-Science 2018. Institute of Electrical and Electronics Engineers Inc., p. 288-289 2 p. 8588674. (Proceedings - IEEE 14th International Conference on eScience, e-Science 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Computer aided diagnosis
Computer-aided Diagnosis
bioinformatics
Bioinformatics
Risk Assessment

Temporal assessment of radiomic features on clinical mammography in a high-risk population

Mendel, K. R., Li, H., Lan, L., Chan, C. W., King, L. M., Tayob, N., Whitman, G. J., El-Zein, R., Bedrosian, I. & Giger, M. L., Jan 1 2018, Medical Imaging 2018: Computer-Aided Diagnosis. Mori, K. & Petrick, N. (eds.). SPIE, Vol. 10575. 105753Q

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Mammography
Risk assessment
risk assessment
Biopsy
cancer

The amiloride derivatives regulate the alternative splicing of apoptotic gene transcripts

Lee, C. C., Chang, W. H., Liu, T. Y., Chen, Y. C., Chen, G. Y., Wu, Y-C. & Chang, J. G., Dec 6 2018, Proceedings - 2018 IEEE 18th International Conference on Bioinformatics and Bioengineering, BIBE 2018. Institute of Electrical and Electronics Engineers Inc., p. 319-322 4 p. 8567508. (Proceedings - 2018 IEEE 18th International Conference on Bioinformatics and Bioengineering, BIBE 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Amiloride
Alternative Splicing
Genes
Derivatives
Oncology

Tissue biomechanics with nanobomb optical coherence elastography

Liu, C. H., Nevozhay, D., Sokolov, K. V. & Larin, K. V., Jan 1 2018, Clinical and Translational Biophotonics, TRANSLATIONAL 2018. OSA - The Optical Society, Vol. Part F91-TRANSLATIONAL 2018.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Biomechanics
Photoexcitation
Phospholipids
Elastic waves
Tissue

TPCNN: Two-phase patch-based convolutional neural network for automatic brain tumor segmentation and survival prediction

Zhou, F., Li, T., Li, H. & Zhu, H., Jan 1 2018, Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries - 3rd International Workshop, BrainLes 2017, Held in Conjunction with MICCAI 2017, Revised Selected Papers. Springer Verlag, p. 274-286 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10670 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Brain Tumor
Patch
Tumors
Tumor
Brain

Tree-based methods for characterizing tumor density heterogeneity

Shoemaker, K., Hobbs, B. P., Bharath, K., Ng, C. S. & Baladandayuthapani, V., Jan 1 2018, PACIFIC SYMPOSIUM ON BIOCOMPUTING 2018. Ritchie, M. D., Hunter, L., Altman, R. B., Murray, T., Klein, T. E. & Dunker, A. K. (eds.). 212669 ed. World Scientific Publishing Co. Pte Ltd, p. 216-227 12 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Area Under Curve
Tumors
Statistics
Tissue
Neoplasms
2017

Adaptive testing of snp-brain functional connectivity association via a modular network analysis

Alzheimer's Disease Neuroimaging Initiative, Jan 1 2017, PACIFIC SYMPOSIUM ON BIOCOMPUTING 2017. Altman, R. B., Murray, T., Klein, T. E., Dunker, A. K., Ritchie, M. D. & Hunter, L. (eds.). 212679 ed. World Scientific Publishing Co. Pte Ltd, p. 58-69 12 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Electric network analysis
Brain
Association reactions
Testing
Sample Size

A framework for optimizing micro-CT in dual-modality micro-CT/XFCT small-animal imaging system

Vedantham, S., Shrestha, S., Karellas, A. & Cho, S. H., Jan 1 2017, Radiation Detectors in Medicine, Industry, and National Security XVIII. Grim, G. P., Furenlid, L. R. & Barber, H. B. (eds.). SPIE, Vol. 10393. 103930R

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Computed Tomography
Imaging System
Imaging systems
Fluorescence
Modality

A new elastography method for liver stiffness based on ultrasound spectral analysis

Pan, H., Lin, C. & Zhou, J-H., Feb 13 2017, Proceedings - 2016 9th International Congress on Image and Signal Processing, BioMedical Engineering and Informatics, CISP-BMEI 2016. Institute of Electrical and Electronics Engineers Inc., p. 1446-1450 5 p. 7852944. (Proceedings - 2016 9th International Congress on Image and Signal Processing, BioMedical Engineering and Informatics, CISP-BMEI 2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Liver
Spectrum analysis
Ultrasonics
Stiffness
Tissue
1 Citations (Scopus)

Assessment of chemoradiotherapy response in glioma with magnetic resonance amide proton transfer imaging in a rodent model

Zhao, J., Chen, Y., Zhao, Y., Yang, S., Chen, Z-P. & Wu, Y., Sep 13 2017, 2017 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Smarter Technology for a Healthier World, EMBC 2017 - Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 541-543 3 p. 8036881. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Chemoradiotherapy
Proton transfer
Magnetic resonance
Amides
Glioma

Boosted tree classifier for in vivo identification of early cervical cancer using multispectral digital colposcopy

Zarei, N., Cox, D., Lane, P., Cantor, S. B., Atkinson, N., Yamal, J. M., Fradkin, L., Serachitopol, D., Lam, S., Niekerk, D., Miller, D., McAlpine, J., Castaneda, K., Castaneda, F., Follen, M. & MacAulay, C., Jan 1 2017, BIOIMAGING 2017 - 4th International Conference on Bioimaging, Proceedings; Part of 10th International Joint Conference on Biomedical Engineering Systems and Technologies, BIOSTEC 2017. Fred, A., Silveira, M., Gamboa, H. & Vaz, M. (eds.). SciTePress, Vol. 2017-January. p. 85-91 7 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Classifiers
Screening
Imaging techniques
Automation
Tissue
5 Citations (Scopus)

Brain tumor segmentation using large receptive field deep convolutional neural networks

Isensee, F., Kickingereder, P., Bonekamp, D., Bendszus, M., Wick, W., Schlemmer, H-P. & Maier-Hein, K., 2017, Bildverarbeitung fur die Medizin 2017: Algorithmen – Systeme – Anwendungen - Proceedings des Workshops. Kluwer Academic Publishers, p. 86-91 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Receptive Field
Brain Tumor
Tumors
Brain
Segmentation
2 Citations (Scopus)

Classification of adrenal lesions through spatial Bayesian modeling of GLCM

Li, X., Guindani, M., Ng, C. S. & Hobbs, B. P., Jun 15 2017, 2017 IEEE 14th International Symposium on Biomedical Imaging, ISBI 2017. IEEE Computer Society, p. 147-151 5 p. 7950489

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Computerized tomography
Pathology
Learning algorithms
Learning systems
Textures