Complete genome sequences of nine enterovirus D68 strains from patients of the Lower Hudson Valley, New York, 2016

Weihua Huang; Changhong Yin; Jian Zhuge; Taliya Farooq; Esther C. Yoon; Sheila M. Nolan; Donald Chen; John T. Fallon; Guiqing Wang

doi:10.1128/genomeA.01394-16

Complete genome sequences of nine enterovirus D68 strains from patients of the Lower Hudson Valley, New York, 2016

Weihua Huang
, Changhong Yin
, Jian Zhuge
, Taliya Farooq
, Esther C. Yoon
, Sheila M. Nolan
, Donald Chen
, John T. Fallon
, Guiqing Wang

Research output: Contribution to journal › Article › peer-review

8 Scopus citations

Abstract

Complete genome sequences of nine enterovirus D68 (EV-D68) strains from patients in New York were obtained in 2016 by metagenomic next-generation sequencing. Comparative genomic analysis suggests that a new subclade B3, with ~4.5% nucleotide divergence from subclade B1 strains causing the 2014 outbreak, is circulating in the United States in 2016.

Original language	English (US)
Article number	e0139416
Journal	Genome Announcements
Volume	4
Issue number	6
DOIs	https://doi.org/10.1128/genomeA.01394-16
State	Published - 2016
Externally published	Yes

ASJC Scopus subject areas

Molecular Biology
Genetics

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title = "Complete genome sequences of nine enterovirus D68 strains from patients of the Lower Hudson Valley, New York, 2016",

abstract = "Complete genome sequences of nine enterovirus D68 (EV-D68) strains from patients in New York were obtained in 2016 by metagenomic next-generation sequencing. Comparative genomic analysis suggests that a new subclade B3, with \textasciitilde{}4.5\% nucleotide divergence from subclade B1 strains causing the 2014 outbreak, is circulating in the United States in 2016.",

author = "Weihua Huang and Changhong Yin and Jian Zhuge and Taliya Farooq and Yoon, \{Esther C.\} and Nolan, \{Sheila M.\} and Donald Chen and Fallon, \{John T.\} and Guiqing Wang",

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AU - Huang, Weihua

AU - Yin, Changhong

AU - Zhuge, Jian

AU - Farooq, Taliya

AU - Yoon, Esther C.

AU - Nolan, Sheila M.

AU - Chen, Donald

AU - Fallon, John T.

AU - Wang, Guiqing

PY - 2016

Y1 - 2016

N2 - Complete genome sequences of nine enterovirus D68 (EV-D68) strains from patients in New York were obtained in 2016 by metagenomic next-generation sequencing. Comparative genomic analysis suggests that a new subclade B3, with ~4.5% nucleotide divergence from subclade B1 strains causing the 2014 outbreak, is circulating in the United States in 2016.

AB - Complete genome sequences of nine enterovirus D68 (EV-D68) strains from patients in New York were obtained in 2016 by metagenomic next-generation sequencing. Comparative genomic analysis suggests that a new subclade B3, with ~4.5% nucleotide divergence from subclade B1 strains causing the 2014 outbreak, is circulating in the United States in 2016.

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DO - 10.1128/genomeA.01394-16

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AN - SCOPUS:85010756169

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JO - Genome Announcements

JF - Genome Announcements

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ER -

Complete genome sequences of nine enterovirus D68 strains from patients of the Lower Hudson Valley, New York, 2016

Abstract

ASJC Scopus subject areas

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