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Deep Learning Super-Resolution from Normal to Ultra-High Resolution CT: Conditional Diffusion Model Development and Performance Evaluation in Trabecular Bone Radiomics

  • Tianyi Ye
  • , Gengxin Shi
  • , Aswath Sivakumar
  • , F. J.Quevedo Gonzalez
  • , R. E. Breighner
  • , J. A. Carrino
  • , J. H. Siewerdsen
  • , Alejandro Sisniega
  • , Wojciech Zbijewski

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Abstract

Purpose: To develop a Conditional Denoising Diffusion Probabilistic Model (Conditional DDPM) for super-resolution (SR) of normal resolution (NR) multi-detector CT images (~0.4 mm detail size) to a level consistent with the recently introduced ultra-high-resolution (UHR) CT (~0.2 mm detail size) and to evaluate the impact of SR on texture metrics of trabecular bone. Methods: Four human cadaver femurs were imaged using Canon Precision CT in an NR mode, with spatial resolution representative of the current conventional multi-detector CT (0.25 x 0.25 x 0.5 mm voxels), and in a novel UHR mode (0.125 x 0.125 x 0.25 mm voxels). For training the conditional DDPM, 7717 spatially-aligned patches (16 x 16 mm) were extracted from the NR and UHR images of two femurs; the NR patch was used as a condition, the UHR patch was the target. Model validation involved 5400 patches from the third femur. Testing was performed by slice-by-slice application of the trained SR on 190 cubic regions of interest (ROIs) from both ends of the fourth femur. The resulting SR images of trabecular bone were evaluated qualitatively and in terms of agreement of radiomic texture metrics with UHR data. Specifically, 24 Grey Level Co-occurrence Matrix (GLCM) features were extracted within 5 mm sphere masks in corresponding cancellous bone regions of the UHR, SR, and NR datasets. Concordance correlation coefficients (CCC) were calculated for NR vs. UHR and SR vs. UHR to assess UHR texture restoration using SR. Additionally, we investigated the overlap of NR vs. UHR and SR vs. UHR texture in a 2-dimensional space span by the first two principal components of ROI GLCM features. Results: Visually, SR using the conditional DDPM appeared to enhance the resolution of NR images (condition) to a level comparable to UHR CT. GLCM matrix visualization confirmed that the SR images resembled the GLCM matrix of UHR CT more closely than NR. Notably, the SR ROIs achieved significantly higher CCCs against UHR for 22 texture features, with an average improvement of 161.3% and a maximum increase of 465.5% for the Inverse Difference Moment. However, two metrics, Cluster Prominence and Cluster Shade, exhibited slightly lower CCCs for SR vs. UHR compared to NR vs. UHR, with reductions of 6.4% and 4.3%, respectively. PCA visualization further confirmed a greater trabecular bone texture feature overlap between SR and UHR compared to NR and UHR. Conclusions: The conditional DDPM successfully enhances NR CT images to UHR quality, enabling more accurate visualization and quantification of bone microarchitecture. Importantly for bone radiomic applications, SR trabecular image texture features agree well with UHR CT for the majority of examined features, which may enable application of SR to harmonize NR data with UHR for predictive model development.

Original languageEnglish (US)
Title of host publicationMedical Imaging 2025
Subtitle of host publicationClinical and Biomedical Imaging
EditorsBarjor S. Gimi, Andrzej Krol
PublisherSPIE
ISBN (Electronic)9781510685987
DOIs
StatePublished - 2025
EventMedical Imaging 2025: Clinical and Biomedical Imaging - San Diego, United States
Duration: Feb 18 2025Feb 21 2025

Publication series

NameProgress in Biomedical Optics and Imaging - Proceedings of SPIE
Volume13410
ISSN (Print)1605-7422

Conference

ConferenceMedical Imaging 2025: Clinical and Biomedical Imaging
Country/TerritoryUnited States
CitySan Diego
Period2/18/252/21/25

Keywords

  • Bone microstructure
  • Deep Learning
  • Diffusion model
  • Radiomics
  • Super resolution CT
  • Texture

ASJC Scopus subject areas

  • Electronic, Optical and Magnetic Materials
  • Atomic and Molecular Physics, and Optics
  • Biomaterials
  • Radiology Nuclear Medicine and imaging

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