Molecular evolution of AP2/ERF gene family in glycine max

Hai Chao Wei; Yuan Liu; Ming Zhu Dou; Su Xin Yang; Xian Zhong Feng

doi:10.13592/j.cnki.ppj.2015.0396

Molecular evolution of AP2/ERF gene family in glycine max

Hai Chao Wei
, Yuan Liu
, Ming Zhu Dou
, Su Xin Yang
, Xian Zhong Feng

Research output: Contribution to journal › Article › peer-review

7 Scopus citations

Abstract

AP₂/ERF gene family plays an important role in the development of plant. In this paper, we identified the soybean AP₂/ERF gene family, analyzed its evolutionary pathway, and studied the expression pattern of its members during seed development. The results showed that the soybean AP₂/ERF gene family contained 355 genes which could be classified into AP₂, RAV and ERF three subfamilies, which experienced two divergence events during the soybean evolution. Seven of them were characterized associating with the differentiation between cultivated soybean and wild soybean during the domestication, and their functions were predicted by their orthologous in Arabidopsis. Ten types of expression pattern of this gene family were revealed by expression profiles during the seed development of soybean, which play various roles in the seed development.

Original language	English (US)
Pages (from-to)	1706-1718
Number of pages	13
Journal	Zhiwu Shengli Xuebao/Plant Physiology Journal
Volume	51
Issue number	10
DOIs	https://doi.org/10.13592/j.cnki.ppj.2015.0396
State	Published - Oct 20 2015
Externally published	Yes

Keywords

AP/ERF gene family
Expression profile analysis
Phylogenetic analysis
Soybean

ASJC Scopus subject areas

General Agricultural and Biological Sciences

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10.13592/j.cnki.ppj.2015.0396

Cite this

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title = "Molecular evolution of AP2/ERF gene family in glycine max",

abstract = "AP2/ERF gene family plays an important role in the development of plant. In this paper, we identified the soybean AP2/ERF gene family, analyzed its evolutionary pathway, and studied the expression pattern of its members during seed development. The results showed that the soybean AP2/ERF gene family contained 355 genes which could be classified into AP2, RAV and ERF three subfamilies, which experienced two divergence events during the soybean evolution. Seven of them were characterized associating with the differentiation between cultivated soybean and wild soybean during the domestication, and their functions were predicted by their orthologous in Arabidopsis. Ten types of expression pattern of this gene family were revealed by expression profiles during the seed development of soybean, which play various roles in the seed development.",

keywords = "AP/ERF gene family, Expression profile analysis, Phylogenetic analysis, Soybean",

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doi = "10.13592/j.cnki.ppj.2015.0396",

language = "English (US)",

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T1 - Molecular evolution of AP2/ERF gene family in glycine max

AU - Wei, Hai Chao

AU - Liu, Yuan

AU - Dou, Ming Zhu

AU - Yang, Su Xin

AU - Feng, Xian Zhong

PY - 2015/10/20

Y1 - 2015/10/20

N2 - AP2/ERF gene family plays an important role in the development of plant. In this paper, we identified the soybean AP2/ERF gene family, analyzed its evolutionary pathway, and studied the expression pattern of its members during seed development. The results showed that the soybean AP2/ERF gene family contained 355 genes which could be classified into AP2, RAV and ERF three subfamilies, which experienced two divergence events during the soybean evolution. Seven of them were characterized associating with the differentiation between cultivated soybean and wild soybean during the domestication, and their functions were predicted by their orthologous in Arabidopsis. Ten types of expression pattern of this gene family were revealed by expression profiles during the seed development of soybean, which play various roles in the seed development.

AB - AP2/ERF gene family plays an important role in the development of plant. In this paper, we identified the soybean AP2/ERF gene family, analyzed its evolutionary pathway, and studied the expression pattern of its members during seed development. The results showed that the soybean AP2/ERF gene family contained 355 genes which could be classified into AP2, RAV and ERF three subfamilies, which experienced two divergence events during the soybean evolution. Seven of them were characterized associating with the differentiation between cultivated soybean and wild soybean during the domestication, and their functions were predicted by their orthologous in Arabidopsis. Ten types of expression pattern of this gene family were revealed by expression profiles during the seed development of soybean, which play various roles in the seed development.

KW - AP/ERF gene family

KW - Expression profile analysis

KW - Phylogenetic analysis

KW - Soybean

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Molecular evolution of AP2/ERF gene family in glycine max

Abstract

Keywords

ASJC Scopus subject areas

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