A weight-adjusted Peto's test when cause of death is not assigned

Hojin Moon, Hongshik Ahn, J. Jack Lee, Ralph L. Kodell

Research output: Contribution to journalArticlepeer-review

Abstract

A new statistical testing approach using a weighted logrank statistic is developed for rodent tumorigenicity assays that have a single terminal sacrifice but not cause-of-death data. Instead of using cause-of-death assignment by pathologists, the number of fatal tumors is estimated by a constrained nonparametric maximum likelihood estimation method. For data lacking cause-of-death information, the Peto test is modified with estimated numbers of fatal tumors and a Fleming-Harrington-type weight, which is based on an estimated tumor survival function. A bootstrap resampling method is used to estimate the weight function. The proposed testing method with the weight adjustment appears to improve the performance in various situations of single-sacrifice animal experiments. A Monte Carlo simulation study for the proposed test is conducted to assess size and power of the test. This testing approach is illustrated using a real data set.

Original languageEnglish (US)
Pages (from-to)95-113
Number of pages19
JournalEnvironmental and Ecological Statistics
Volume12
Issue number1
DOIs
StatePublished - Mar 2005

Keywords

  • Bioassay
  • Bootstrap
  • Competing risk
  • Fatal tumor
  • Single sacrifice
  • Weight function

ASJC Scopus subject areas

  • Statistics and Probability
  • General Environmental Science
  • Statistics, Probability and Uncertainty

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