TY - GEN
T1 - An analysis and hypothesis generation platform for heterogeneous cancer databases
AU - Quinlan, Philip Roy
AU - Thompson, Alastair
AU - Reed, Chris
N1 - Copyright:
Copyright 2016 Elsevier B.V., All rights reserved.
PY - 2012
Y1 - 2012
N2 - The field of cancer research is now generating vast amounts of data from a variety of high throughput techniques and these have helped to define cancers based on their genetic foundations. As this knowledge on the processes and underlying genetics of cancer improve, these should be factored back into the research and analyses conducted by other researchers. Managing this volume of data, often conflicting, is becoming increasingly challenging for researchers. This work demonstrates an innovative application of argumentation theory within cancer research by providing a framework to accommodate missing data, address critical questions and generate hypotheses. The prototype system has been validated to demonstrate it identifies the same interesting interactions and molecules as researchers, even when certain key data was deliberately withheld from the system.
AB - The field of cancer research is now generating vast amounts of data from a variety of high throughput techniques and these have helped to define cancers based on their genetic foundations. As this knowledge on the processes and underlying genetics of cancer improve, these should be factored back into the research and analyses conducted by other researchers. Managing this volume of data, often conflicting, is becoming increasingly challenging for researchers. This work demonstrates an innovative application of argumentation theory within cancer research by providing a framework to accommodate missing data, address critical questions and generate hypotheses. The prototype system has been validated to demonstrate it identifies the same interesting interactions and molecules as researchers, even when certain key data was deliberately withheld from the system.
KW - Application of argumentation
KW - Automated statistical analysis
KW - Breast cancer research
KW - Hypothesis generation
KW - TOAST
UR - http://www.scopus.com/inward/record.url?scp=84876248397&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=84876248397&partnerID=8YFLogxK
U2 - 10.3233/978-1-61499-111-3-59
DO - 10.3233/978-1-61499-111-3-59
M3 - Conference contribution
AN - SCOPUS:84876248397
SN - 9781614991106
T3 - Frontiers in Artificial Intelligence and Applications
SP - 59
EP - 70
BT - Computational Models of Argument - Proceedings of COMMA 2012
PB - IOS Press
ER -