Automated Cellular-Level Dual Global Fusion of Whole-Slide Imaging for Lung Adenocarcinoma Prognosis

Songhui Diao, Pingjun Chen, Eman Showkatian, Rukhmini Bandyopadhyay, Frank R. Rojas, Bo Zhu, Lingzhi Hong, Muhammad Aminu, Maliazurina B. Saad, Morteza Salehjahromi, Amgad Muneer, Sheeba J. Sujit, Carmen Behrens, Don L. Gibbons, John V. Heymach, Neda Kalhor, Ignacio I. Wistuba, Luisa M. Solis Soto, Jianjun Zhang, Wenjian QinJia Wu

Research output: Contribution to journalArticlepeer-review

Abstract

Histopathologic whole-slide images (WSI) are generally considered the gold standard for cancer diagnosis and prognosis. Survival prediction based on WSI has recently attracted substantial attention. Nevertheless, it remains a central challenge owing to the inherent difficulties of predicting patient prognosis and effectively extracting informative survival-specific representations from WSI with highly compounded gigapixels. In this study, we present a fully automated cellular-level dual global fusion pipeline for survival prediction. Specifically, the proposed method first describes the composition of different cell populations on WSI. Then, it generates dimension-reduced WSI-embedded maps, allowing for efficient investigation of the tumor microenvironment. In addition, we introduce a novel dual global fusion network to incorporate global and inter-patch features of cell distribution, which enables the sufficient fusion of different types and locations of cells. We further validate the proposed pipeline using The Cancer Genome Atlas lung adenocarcinoma dataset. Our model achieves a C-index of 0.675 (±0.05) in the five-fold cross-validation setting and surpasses comparable methods. Further, we extensively analyze embedded map features and survival probabilities. These experimental results manifest the potential of our proposed pipeline for applications using WSI in lung adenocarcinoma and other malignancies.

Original languageEnglish (US)
Article number4824
JournalCancers
Volume15
Issue number19
DOIs
StatePublished - Oct 2023

Keywords

  • cellular architecture
  • embedded features
  • global fusion
  • lung adenocarcinoma
  • survival prediction
  • whole-slide image

ASJC Scopus subject areas

  • Oncology
  • Cancer Research

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