Biobanking in genomic medicine

Research output: Contribution to journalReview articlepeer-review

24 Scopus citations

Abstract

Context.-Genomic medicine requires the identification of biomarkers and therapeutic targets, which in turn, requires high-quality biospecimens. Achieving high-quality biospecimens requires implementing standard operating procedures to control the variations of preanalytic variables in biobanking. Currently, most biobanks do not control the variations of preanalytic variables when collecting, processing, and storing their biospecimens. However, those variations have been shown to affect the quality of biospecimens and gene expression profiling. Objective.-To identify evidence-based preanalytic parameters that can be applied and those parameters that need further study. Data Sources.-We searched the Biospecimen Research and PubMed databases using defined . We retrieved and reviewed 212 articles obtained through those searches. We included 58 articles (27%) according to our inclusion and exclusion criteria for this review. Conclusion.-Preanalytic variables in biobanking can degrade the quality of biospecimens and alter gene expression profiling. Variables that require further study include the effect of surgical manipulation; the effect of warm ischemia; the allowable duration of delayed specimen processing; the optimal type, duration, and temperature of preservation and fixation; and the optimal storage duration of formalin-fixed, paraffin embedded specimens in a fit-for-purpose approach.

Original languageEnglish (US)
Pages (from-to)812-818
Number of pages7
JournalArchives of Pathology and Laboratory Medicine
Volume139
Issue number6
DOIs
StatePublished - Jun 1 2015

ASJC Scopus subject areas

  • Pathology and Forensic Medicine
  • Medical Laboratory Technology

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