Erratum to: An integrative genomics approach for identifying novel functional consequences of PBRM1 truncated mutations in clear cell renal cell carcinoma (ccRCC) [BMC Genomics. 17, Suppl 7, (2016), (515)]

Yuanyuan Wang; Xingyi Guo; Michael J. Bray; Zhiyong Ding; Zhongming Zhao

doi:10.1186/s12864-016-3141-0

Erratum to: An integrative genomics approach for identifying novel functional consequences of PBRM1 truncated mutations in clear cell renal cell carcinoma (ccRCC) [BMC Genomics. 17, Suppl 7, (2016), (515)]

Yuanyuan Wang, Xingyi Guo, Michael J. Bray, Zhiyong Ding, Zhongming Zhao

Systems Biology

Research output: Contribution to journal › Comment/debate › peer-review

1 Scopus citations

Abstract

Following publication of the original article [1] it was brought to our attention that there were three errors in the "Results" section of the article's abstract. Please see below for the two sentences in which these errors occur: 1. We identified 613 differentially expressed genes (128 up-regulated and 485 down-regulated genes using cutoff |log₂FC| < 1 and p < 0.05) in PBRM1 mutated group versus "pan-negative" group. 2. In addition, we identified 1405 differentially methylated CpG sites (targeting 1308 genes, |log₂FC| < 1, p < 0.01) and 185 significantly altered microRNAs (|log₂FC| < 1, p < 0.05) associated with truncated PBRM1 mutations. In both sentences the present expression in the article is "|log₂FC| < 1". However, this is incorrect, as the cutoff should be "|log2FC| > 1".

Original language	English (US)
Article number	821
Journal	BMC genomics
Volume	17
Issue number	1
DOIs	https://doi.org/10.1186/s12864-016-3141-0
State	Published - Oct 21 2016

ASJC Scopus subject areas

Biotechnology
Genetics

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Erratum to: An integrative genomics approach for identifying novel functional consequences of PBRM1 truncated mutations in clear cell renal cell carcinoma (ccRCC) [BMC Genomics. 17, Suppl 7, (2016), (515)]. / Wang, Yuanyuan; Guo, Xingyi; Bray, Michael J. et al.
In: BMC genomics, Vol. 17, No. 1, 821, 21.10.2016.

Research output: Contribution to journal › Comment/debate › peer-review

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T2 - An integrative genomics approach for identifying novel functional consequences of PBRM1 truncated mutations in clear cell renal cell carcinoma (ccRCC) [BMC Genomics. 17, Suppl 7, (2016), (515)]

AU - Wang, Yuanyuan

AU - Guo, Xingyi

AU - Bray, Michael J.

AU - Ding, Zhiyong

AU - Zhao, Zhongming

PY - 2016/10/21

Y1 - 2016/10/21

N2 - Following publication of the original article [1] it was brought to our attention that there were three errors in the "Results" section of the article's abstract. Please see below for the two sentences in which these errors occur: 1. We identified 613 differentially expressed genes (128 up-regulated and 485 down-regulated genes using cutoff |log2FC| < 1 and p < 0.05) in PBRM1 mutated group versus "pan-negative" group. 2. In addition, we identified 1405 differentially methylated CpG sites (targeting 1308 genes, |log2FC| < 1, p < 0.01) and 185 significantly altered microRNAs (|log2FC| < 1, p < 0.05) associated with truncated PBRM1 mutations. In both sentences the present expression in the article is "|log2FC| < 1". However, this is incorrect, as the cutoff should be "|log2FC| > 1".

AB - Following publication of the original article [1] it was brought to our attention that there were three errors in the "Results" section of the article's abstract. Please see below for the two sentences in which these errors occur: 1. We identified 613 differentially expressed genes (128 up-regulated and 485 down-regulated genes using cutoff |log2FC| < 1 and p < 0.05) in PBRM1 mutated group versus "pan-negative" group. 2. In addition, we identified 1405 differentially methylated CpG sites (targeting 1308 genes, |log2FC| < 1, p < 0.01) and 185 significantly altered microRNAs (|log2FC| < 1, p < 0.05) associated with truncated PBRM1 mutations. In both sentences the present expression in the article is "|log2FC| < 1". However, this is incorrect, as the cutoff should be "|log2FC| > 1".

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Erratum to: An integrative genomics approach for identifying novel functional consequences of PBRM1 truncated mutations in clear cell renal cell carcinoma (ccRCC) [BMC Genomics. 17, Suppl 7, (2016), (515)]

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