Spatial single-cell sequencing of meiosis I arrested oocytes indicates acquisition of maternal transcripts from the soma

Kenneth A. Trimmer, Peisen Zhao, Jacob Seemann, Shin Yu Chen, Sudip Mondal, Adela Ben-Yakar, Swathi Arur

Research output: Contribution to journalArticlepeer-review

1 Scopus citations

Abstract

Maternal RNAs are stored from minutes to decades in oocytes throughout meiosis I arrest in a transcriptionally quiescent state. Recent reports, however, propose a role for nascent transcription in arrested oocytes. Whether arrested oocytes launch nascent transcription in response to environmental or hormonal signals while maintaining the meiosis I arrest remains undetermined. We test this by integrating single-cell RNA sequencing, RNA velocity, and RNA fluorescence in situ hybridization on C. elegans meiosis I arrested oocytes. We identify transcripts that increase as the arrested meiosis I oocyte ages, but rule out extracellular signaling through ERK MAPK and nascent transcription as a mechanism for this increase. We report transcript acquisition from neighboring somatic cells as a mechanism of transcript increase during meiosis I arrest. These analyses provide a deeper view at single-cell resolution of the RNA landscape of a meiosis I arrested oocyte and as it prepares for oocyte maturation and fertilization.

Original languageEnglish (US)
Article number112544
JournalCell Reports
Volume42
Issue number6
DOIs
StatePublished - Jun 27 2023

Keywords

  • C. elegans
  • CP: Developmental biology
  • CP: Molecular biology
  • Maternal Transcripts
  • Oocytes
  • Single Cell Sequencing

ASJC Scopus subject areas

  • General Biochemistry, Genetics and Molecular Biology

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