Abstract
Dasatinib is a second-generation BCR-ABL inhibitor approved for the treatment of patients with chronic myeloid leukemia, both in the frontline and in the imatinib-resistant/intolerant settings. The high affinity of dasatinib for the protein is currently assumed to result from its ability to bind both the active and inactive conformations of the BCR-ABL kinase. In the present work, using state of the art molecular simulation techniques we prove that dasatinib exhibits a highly selective preference for the active (open) BCR-ABL conformation. By using three different BCR-ABL conformations (active, inactive, andintermediate inactive) we show that, from a thermodynamic standpoint, the affinity of dasatinib for BCR-ABL drastically decreases in the order: active>alternative inactive>inactive, as a result of differential contributions from the single residues lining the kinase binding pocket and the concomitant stabilization/destabilization of the kinase hydrophobic spine. Molecule-pulling experiments also corroborate this trend as significantly lower forces and smaller times are required to extract dasatinib from its inactive BCR-ABL complexes with respect to the active complex counterparts. Importantly, our results support recent NMR solution results demonstrating no evidence of dasatinib bound to the inactive form of BCR-ABL.
Original language | English (US) |
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Pages (from-to) | 968-975 |
Number of pages | 8 |
Journal | Molecular oncology |
Volume | 7 |
Issue number | 5 |
DOIs | |
State | Published - Oct 2013 |
Keywords
- BCR-ABL
- Binding mode
- Dasatinib
- Hydrophobic-spine
- Resistance
ASJC Scopus subject areas
- Molecular Medicine
- Genetics
- Oncology
- Cancer Research