Epidemiology

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  • Article

    Allostatic score and its associations with demographics, healthy behaviors, tumor characteristics, and mitochondrial DNA among breast cancer patients

    Zhao, H., Song, R., Ye, Y., Chow, W. H. & Shen, J., Jun 2021, In: Breast Cancer Research and Treatment. 187, 2, p. 587-596 10 p.

    Research output: Contribution to journal › Article › peer-review

    18 Scopus citations

  • ALPK1 missense pathogenic variant in five families leads to ROSAH syndrome, an ocular multisystem autosomal dominant disorder

    Williams, L. B., Javed, A., Sabri, A., Morgan, D. J., Huff, C. D., Grigg, J. R., Heng, X. T., Khng, A. J., Hollink, I. H. I. M., Morrison, M. A., Owen, L. A., Anderson, K., Kinard, K., Greenlees, R., Novacic, D., Nida Sen, H., Zein, W. M., Rodgers, G. M., Vitale, A. T., Haider, N. B., & 21 othersHillmer, A. M., Ng, P. C., Shankaracharya, Cheng, A., Zheng, L., Gillies, M. C., van Slegtenhorst, M., van Hagen, P. M., Missotten, T. O. A. R., Farley, G. L., Polo, M., Malatack, J., Curtin, J., Martin, F., Arbuckle, S., Alexander, S. I., Chircop, M., Davila, S., Digre, K. B., Jamieson, R. V. & DeAngelis, M. M., Sep 1 2019, In: Genetics in Medicine. 21, 9, p. 2103-2115 13 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    28 Scopus citations

  • Alternating hemiplegia of childhood: Retrospective genetic study and genotype-phenotype correlations in 187 subjects from the US AHCF registry

    Viollet, L., Glusman, G., Murphy, K. J., Newcomb, T. M., Reyna, S. P., Sweney, M., Nelson, B., Andermann, F., Andermann, E., Acsadi, G., Barbano, R. L., Brown, C., Brunkow, M. E., Chugani, H. T., Cheyette, S. R., Collins, A., DeBrosse, S. D., Galas, D., Friedman, J., Hood, L., & 21 othersHuff, C., Jorde, L. B., King, M. D., LaSalle, B., Leventer, R. J., Lewelt, A. J., Massart, M. B., Mérida, M. R., Ptáček, L. J., Roach, J. C., Rust, R. S., Renault, F., Sanger, T. D., De Menezes, M. A. S., Tennyson, R., Uldall, P., Zhang, Y., Zupanc, M., Xin, W., Silver, K. & Swoboda, K. J., May 21 2015, In: PloS one. 10, 5, e0127045.

    Research output: Contribution to journal › Article › peer-review

    62 Scopus citations

  • A machine learning model to predict hepatocellular carcinoma response to transcatheter arterial chemoembolization

    Morshid, A., Elsayes, K. M., Khalaf, A. M., Elmohr, M. M., Yu, J., Kaseb, A. O., Hassan, M., Mahvash, A., Wang, Z., Hazle, J. D. & Fuentes, D., Sep 2019, In: Radiology: Artificial Intelligence. 1, 5, e180021.

    Research output: Contribution to journal › Article › peer-review

    82 Scopus citations

  • A map of human genome variation from population-scale sequencing

    Altshuler, D. L., Durbin, R. M., Abecasis, G. R., Bentley, D. R., Chakravarti, A., Clark, A. G., Collins, F. S., De La Vega, F. M., Donnelly, P., Egholm, M., Flicek, P., Gabriel, S. B., Gibbs, R. A., Knoppers, B. M., Lander, E. S., Lehrach, H., Mardis, E. R., McVean, G. A., Nickerson, D. A., Peltonen, L., & 348 othersSchafer, A. J., Sherry, S. T., Wang, J., Wilson, R. K., Deiros, D., Metzker, M., Muzny, D., Reid, J., Wheeler, D., Wang, S. J., Li, J., Jian, M., Li, G., Li, R., Liang, H., Tian, G., Wang, B., Wang, J., Wang, W., Yang, H., Zhang, X., Zheng, H., Ambrogio, L., Bloom, T., Cibulskis, K., Fennell, T. J., Jaffe, D. B., Shefler, E., Sougnez, C. L., Bentley, I. D. R., Gormley, N., Humphray, S., Kingsbury, Z., Koko-Gonzales, P., Stone, J., Mc Kernan, K. J., Costa, G. L., Ichikawa, J. K., Lee, C. C., Sudbrak, R., Borodina, T. A., Dahl, A., Davydov, A. N., Marquardt, P., Mertes, F., Nietfeld, W., Rosenstiel, P., Schreiber, S., Soldatov, A. V., Timmermann, B., Tolzmann, M., Affourtit, J., Ashworth, D., Attiya, S., Bachorski, M., Buglione, E., Burke, A., Caprio, A., Celone, C., Clark, S., Conners, D., Desany, B., Gu, L., Guccione, L., Kao, K., Kebbel, A., Knowlton, J., Labrecque, M., McDade, L., Mealmaker, C., Minderman, M., Nawrocki, A., Niazi, F., Pareja, K., Ramenani, R., Riches, D., Song, W., Turcotte, C., Wang, S., Dooling, D., Fulton, L., Fulton, R., Weinstock, G., Burton, J., Carter, D. M., Churcher, C., Coffey, A., Cox, A., Palotie, A., Quail, M., Skelly, T., Stalker, J., Swerdlow, H. P., Turner, D., De Witte, A., Giles, S., Bainbridge, M., Challis, D., Sabo, A., Yu, F., Yu, J., Fang, X., Guo, X., Li, Y., Luo, R., Tai, S., Wu, H., Zheng, H., Zheng, X., Zhou, Y., Marth, G. T., Garrison, E. P., Huang, W., Indap, A., Kural, D., Lee, W. P., Leong, W. F., Quinlan, A. R., Stewart, C., Stromberg, M. P., Ward, A. N., Wu, J., Lee, C., Mills, R. E., Shi, X., Daly, M. J., DePristo, M. A., Ball, A. D., Banks, E., Browning, B. L., Garimella, K. V., Grossman, S. R., Handsaker, R. E., Hanna, M., Hartl, C., Kernytsky, A. M., Korn, J. M., Li, H., Maguire, J. R., McKenna, A., Nemesh, J. C., Philippakis, A. A., Poplin, R. E., Price, A., Rivas, M. A., Sabeti, P. C., Schaffner, S. F., Shlyakhter, I. A., Cooper, D. N., Ball, E. V., Mort, M., Phillips, A. D., Stenson, P. D., Sebat, J., Makarov, V., Ye, K., Yoon, S. C., Bustamante, C. D., Boyko, A., Degenhardt, J., Gravel, S., Gutenkunst, R. N., Kaganovich, M., Keinan, A., Lacroute, P., Ma, X., Reynolds, A., Clarke, L., Cunningham, F., Herrero, J., Keenen, S., Kulesha, E., Leinonen, R., McLaren, W. M., Radhakrishnan, R., Smith, R. E., Zalunin, V., Korbel, J. O., Stütz, A. M., Humphray, I. S., Bauer, M., Cheetham, R. K., Cox, T., Eberle, M., James, T., Kahn, S., Murray, L., Ye, K., Fu, Y., Hyland, F. C. L., Manning, J. M., Stephen, F. M., Peckham, H. E., Sakarya, O., Sun, Y. A., Tsung, E. F., Mark, A. B., Konkel, M. K., Walker, J. A., Albrecht, M. W., Amstislavskiy, V. S., Herwig, R., Parkhomchuk, D. V., Agarwala, R., Khouri, H. M., Morgulis, A. O., Paschall, J. E., Phan, L. D., Rotmistrovsky, K. E., Sanders, R. D., Shumway, M. F., Xiao, C., Gil, A. M., Auton, A., Iqbal, Z., Lunter, G., Marchini, J. L., Moutsianas, L., Myers, S., Tumian, A., Knight, J., Winer, R., Craig, D. W., Beckstrom-Sternberg, S. M., Christoforides, A., Kurdoglu, A. A., Pearson, J. V., Sinari, S. A., Tembe, W. D., Haussler, D., Hinrichs, A. S., Katzman, S. J., Kern, A., Kuhn, R. M., Przeworski, M., Hernandez, R. D., Howie, B., Kelley, J. L., Melton, S. C., Li, Y., Anderson, P., Blackwell, T., Chen, W., Cookson, W. O., Ding, J., Kang, H. M., Lathrop, M., Liang, L., Moffatt, M. F., Scheet, P., Sidore, C., Snyder, M., Zhan, X., Zöllner, S., Awadalla, P., Casals, F., Idaghdour, Y., Keebler, J., Stone, E. A., Zilversmit, M., Jorde, L., Xing, J., Eichler, E. E., Aksay, G., Alkan, C., Hajirasouliha, I., Hormozdiari, F., Kidd, J. M., CenkSahinalp, S., Sudmant, P. H., Chen, K., Chinwalla, A., Ding, L., Koboldt, D. C., McLellan, M. D., Wallis, J. W., Wendl, M. C., Zhang, Q., Albers, C. A., Ayub, Q., Balasubramaniam, S., Barrett, J. C., Chen, Y., Conrad, D. F., Danecek, P., Dermitzakis, E. T., Hu, M., Huang, N., Matt, E. H., Jin, H., Jostins, L., Keane, T. M., Quang Le, S., Lindsay, S., Long, Q., MacArthur, D. G., Montgomery, S. B., Parts, L., Chris Tyler-Smith, T-S., Walter, K., Zhang, Y., Gerstein, M. B., Snyder, M., Abyzov, A., Balasubramanian, S., Bjornson, R., Grubert, F., Habegger, L., Haraksingh, R., Khurana, E., Lam, H. Y. K., Leng, J., Mu, X. J., Urban, A. E., Zhang, Z., McCarroll, S. A., Zheng-Bradley, X., Batzer, M. A., Hurles, M. E., Du, J., Jee, J., Coafra, C., Dinh, H., Kovar, C., Lee, S., Nazareth, L., Wilkinson, J., Coffey, A., Scott, C., Tyler-Smith, C., Gharani, N., Kaye, J. S., Kent, A., Li, T., McGuire, A. L., Ossorio, P. N., Rotimi, C. N., Su, Y., Toji, L. H., Felsenfeld, A. L., McEwen, J. E., Abdallah, A., Juenger, C. R., Clemm, N. C., Duncanson, A., Green, E. D., Guyer, M. S. & Peterson, J. L., Oct 28 2010, In: Nature. 467, 7319, p. 1061-1073 13 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    6193 Scopus citations

  • AMC-070: Lenalidomide Is Safe and Effective in HIV-Associated Kaposi Sarcoma

    AIDS Malignancy Consortium (AMC), Jun 15 2022, In: Clinical Cancer Research. 28, 12, p. 2646-2656 11 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    8 Scopus citations

  • A meta-analysis identifies new loci associated with body mass index in individuals of African ancestry

    Monda, K. L., Chen, G. K., Taylor, K. C., Palmer, C., Edwards, T. L., Lange, L. A., Ng, M. C. Y., Adeyemo, A. A., Allison, M. A., Bielak, L. F., Chen, G., Graff, M., Irvin, M. R., Rhie, S. K., Li, G., Liu, Y., Liu, Y., Lu, Y., Nalls, M. A., Sun, Y. V., & 188 othersWojczynski, M. K., Yanek, L. R., Aldrich, M. C., Ademola, A., Amos, C. I., Bandera, E. V., Bock, C. H., Britton, A., Broeckel, U., Cai, Q., Caporaso, N. E., Carlson, C. S., Carpten, J., Casey, G., Chen, W. M., Chen, F., Chen, Y. D. I., Chiang, C. W. K., Coetzee, G. A., Demerath, E., Deming-Halverson, S. L., Driver, R. W., Dubbert, P., Feitosa, M. F., Feng, Y., Freedman, B. I., Gillanders, E. M., Gottesman, O., Guo, X., Haritunians, T., Harris, T., Harris, C. C., Hennis, A. J. M., Hernandez, D. G., McNeill, L. H., Howard, T. D., Howard, B. V., Howard, V. J., Johnson, K. C., Kang, S. J., Keating, B. J., Kolb, S., Kuller, L. H., Kutlar, A., Langefeld, C. D., Lettre, G., Lohman, K., Lotay, V., Lyon, H., Manson, J. E., Maixner, W., Meng, Y. A., Monroe, K. R., Morhason-Bello, I., Murphy, A. B., Mychaleckyj, J. C., Nadukuru, R., Nathanson, K. L., Nayak, U., N'Diaye, A., Nemesure, B., Wu, S. Y., Leske, M. C., Neslund-Dudas, C., Neuhouser, M., Nyante, S., Ochs-Balcom, H., Ogunniyi, A., Ogundiran, T. O., Ojengbede, O., Olopade, O. I., Palmer, J. R., Ruiz-Narvaez, E. A., Palmer, N. D., Press, M. F., Rampersaud, E., Rasmussen-Torvik, L. J., Rodriguez-Gil, J. L., Salako, B., Schadt, E. E., Schwartz, A. G., Shriner, D. A., Siscovick, D., Smith, S. B., Wassertheil-Smoller, S., Speliotes, E. K., Spitz, M. R., Sucheston, L., Taylor, H., Tayo, B. O., Tucker, M. A., Van Den Berg, D. J., Edwards, D. R. V., Wang, Z., Wiencke, J. K., Winkler, T. W., Witte, J. S., Wrensch, M., Wu, X., Yang, J. J., Levin, A. M., Young, T. R., Zakai, N. A., Cushman, M., Zanetti, K. A., Zhao, J. H., Zhao, W., Zheng, Y., Zhou, J., Ziegler, R. G., Zmuda, J. M., Fernandes, J. K., Gilkeson, G. S., Kamen, D. L., Hunt, K. J., Spruill, I. J., Ambrosone, C. B., Ambs, S., Arnett, D. K., Atwood, L., Becker, D. M., Berndt, S. I., Bernstein, L., Blot, W. J., Borecki, I. B., Bottinger, E. P., Bowden, D. W., Burke, G., Chanock, S. J., Cooper, R. S., Ding, J., Duggan, D., Evans, M. K., Fox, C., Garvey, W. T., Bradfield, J. P., Hakonarson, H., Grant, S. F. A., Hsing, A., Chu, L., Hu, J. J., Huo, D., Ingles, S. A., John, E. M., Jordan, J. M., Kabagambe, E. K., Kardia, S. L. R., Kittles, R. A., Goodman, P. J., Klein, E. A., Kolonel, L. N., Le Marchand, L., Liu, S., McKnight, B., Millikan, R. C., Mosley, T. H., Padhukasahasram, B., Williams, L. K., Patel, S. R., Peters, U., Pettaway, C. A., Peyser, P. A., Psaty, B. M., Redline, S., Rotimi, C. N., Rybicki, B. A., Sale, M. M., Schreiner, P. J., Signorello, L. B., Singleton, A. B., Stanford, J. L., Strom, S. S., Thun, M. J., Vitolins, M., Zheng, W., Moore, J. H., Williams, S. M., Ketkar, S., Zhu, X., Zonderman, A. B., Kooperberg, C., Papanicolaou, G. J., Henderson, B. E., Reiner, A. P., Hirschhorn, J. N., Loos, R. J. F., North, K. E. & Haiman, C. A., Jun 2013, In: Nature Genetics. 45, 6, p. 690-696 7 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    203 Scopus citations

  • A meta-analysis of 87,040 individuals identifies 23 new susceptibility loci for prostate cancer

    Olama, A. A. A., Kote-Jarai, Z., Berndt, S. I., Conti, D. V., Schumacher, F., Han, Y., Benlloch, S., Hazelett, D. J., Wang, Z., Saunders, E., Leongamornlert, D., Lindstrom, S., Jugurnauth-Little, S., Dadaev, T., Tymrakiewicz, M., Stram, D. O., Rand, K., Wan, P., Stram, A., Sheng, X., & 144 othersPooler, L. C., Park, K., Xia, L., Tyrer, J., Kolonel, L. N., Marchand, L. L., Hoover, R. N., Machiela, M. J., Yeager, M., Burdette, L., Chung, C. C., Hutchinson, A., Yu, K., Goh, C., Ahmed, M., Govindasami, K., Guy, M., Tammela, T. L. J., Auvinen, A., Wahlfors, T., Schleutker, J., Visakorpi, T., Leinonen, K. A., Xu, J., Aly, M., Donovan, J., Travis, R. C., Key, T. J., Siddiq, A., Canzian, F., Khaw, K. T., Takahashi, A., Kubo, M., Pharoah, P., Pashayan, N., Weischer, M., Nordestgaard, B. G., Nielsen, S. F., Klarskov, P., Røder, M. A., Iversen, P., Thibodeau, S. N., McDonnell, S. K., Schaid, D. J., Stanford, J. L., Kolb, S., Holt, S., Knudsen, B., Coll, A. H., Gapstur, S. M., Diver, W. R., Stevens, V. L., Maier, C., Luedeke, M., Herkommer, K., Rinckleb, A. E., Strom, S. S., Pettaway, C., Yeboah, E. D., Tettey, Y., Biritwum, R. B., Adjei, A. A., Tay, E., Truelove, A., Niwa, S., Chokkalingam, A. P., Cannon-Albright, L., Cybulski, C., Wokołorczyk, D., Kluźniak, W., Park, J., Sellers, T., Lin, H. Y., Isaacs, W. B., Partin, A. W., Brenner, H., Dieffenbach, A. K., Stegmaier, C., Chen, C., Giovannucci, E. L., Ma, J., Stampfer, M., Penney, K. L., Mucci, L., John, E. M., Ingles, S. A., Kittles, R. A., Murphy, A. B., Pandha, H., Michael, A., Kierzek, A. M., Blot, W., Signorello, L. B., Zheng, W., Albanes, D., Virtamo, J., Weinstein, S., Nemesure, B., Carpten, J., Leske, C., Wu, S. Y., Hennis, A., Kibel, A. S., Rybicki, B. A., Neslund-Dudas, C., Hsing, A. W., Chu, L., Goodman, P. J., Klein, E. A., Zheng, S. L., Batra, J., Clements, J., Spurdle, A., Teixeira, M. R., Paulo, P., Maia, S., Slavov, C., Kaneva, R., Mitev, V., Witte, J. S., Casey, G., Gillanders, E. M., Seminara, D., Riboli, E., Hamdy, F. C., Coetzee, G. A., Li, Q., Freedman, M. L., Hunter, D. J., Muir, K., Gronberg, H., Neal, D. E., Southey, M., Giles, G. G., Severi, G., Cook, M. B., Nakagawa, H., Wiklund, F., Kraft, P., Chanock, S. J., Henderson, B. E., Easton, D. F., Eeles, R. A. & Haiman, C. A., Sep 26 2014, In: Nature Genetics. 46, 10, p. 1103-1109 7 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    371 Scopus citations

  • A meta-analysis of MTHFR C677T and A1298C polymorphisms and risk of acute lymphoblastic leukemia in children

    Yan, J., Yin, M., Dreyer, Z. E., Scheurer, M. E., Kamdar, K., Wei, Q. & Okcu, M. F., Apr 2012, In: Pediatric Blood and Cancer. 58, 4, p. 513-518 6 p.

    Research output: Contribution to journal › Article › peer-review

    61 Scopus citations

  • A meta-analysis of multiple myeloma risk regions in African and European ancestry populations identifies putatively functional loci

    Rand, K. A., Song, C., Dean, E., Serie, D. J., Curtin, K., Sheng, X., Hu, D., Huff, C. A., Bernal-Mizrachi, L., Tomasson, H. M., Ailawadhi, S., Singhal, S., Pawlish, K., Peters, E. S., Bock, C. H., Stram, A., Van Den Berg, D. J., Edlund, C. K., Conti, D. V., Zimmerman, T., & 82 othersHwang, A. E., Huntsman, S., Graff, J., Nooka, A., Kong, Y., Pregja, S. L., Berndt, S. I., Blot, W. J., Carpten, J., Casey, G., Chu, L., Diver, W. R., Stevens, V. L., Lieber, M. R., Goodman, P. J., Hennis, A. J. M., Hsing, A. W., Mehta, J., Kittles, R. A., Kolb, S., Klein, E. A., Leske, C., Murphy, A. B., Nemesure, B., Neslund-Dudas, C., Strom, S. S., Vij, R., Rybicki, B. A., Stanford, J. L., Signorello, L. B., Witte, J. S., Ambrosone, C. B., Bhatti, P., John, E. M., Bernstein, L., Zheng, W., Olshan, A. F., Hu, J. J., Ziegler, R. G., Nyante, S. J., Bandera, E. V., Birmann, B. M., Ingles, S. A., Press, M. F., Atanackovic, D., Glenn, M. J., Cannon-Albright, L. A., Jones, B., Tricot, G., Martin, T. G., Kumar, S. K., Wolf, J. L., Deming Halverson, S. L., Rothman, N., Brooks-Wilson, A. R., Rajkumar, S. V., Kolonel, L. N., Chanock, S. J., Slager, S. L., Severson, R. K., Janakiraman, N., Terebelo, H. R., Brown, E. E., De Roos, A. J., Mohrbacher, A. F., Colditz, G. A., Giles, G. G., Spinelli, J. J., Chiu, B. C., Munshi, N. C., Anderson, K. C., Levy, J., Zonder, J. A., Orlowski, R. Z., Lonial, S., Camp, N. J., Vachon, C. M., Ziv, E., Stram, D. O., Hazelett, D. J., Haiman, C. A. & Cozen, W., Dec 1 2016, In: Cancer Epidemiology Biomarkers and Prevention. 25, 12, p. 1609-1618 10 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    18 Scopus citations

  • A meta-analytic framework for detection of genetic interactions

    Liu, Y., Chen, Y. & Scheet, P., Nov 1 2016, In: Genetic epidemiology. 40, 7, p. 534-543 10 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    2 Scopus citations

  • A migration signature and plasma biomarker panel for pancreatic adenocarcinoma

    Balasenthil, S., Chen, N., Lott, S. T., Chen, J., Carter, J., Grizzle, W. E., Frazier, M. L., Sen, S. & Killary, A. M. N., Jan 2011, In: Cancer Prevention Research. 4, 1, p. 137-149 13 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    41 Scopus citations

  • A miR-SNP biomarker linked to an increased lung cancer survival by miRNA-mediated down-regulation of FZD4 expression and Wnt signaling

    Lin, J., Zandi, R., Shao, R., Gu, J., Ye, Y., Wang, J., Zhao, Y., Pertsemlidis, A., Wistuba, I. I., Wu, X., Roth, J. A. & Ji, L., Dec 1 2017, In: Scientific reports. 7, 1, 9029.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    21 Scopus citations

  • A Mixed Methods Study on Engagement and Satisfaction with a Digitally-Enhanced Pilot Intervention Among African American and Hispanic Women

    John, J. C., Wang, J., McNeill, L. H. M., Basen-Engquist, K., Hoover, D. S., Daniel, C. R. & Strong, L. L., Oct 2021, In: Journal of Immigrant and Minority Health. 23, 5, p. 1011-1020 10 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access

  • A model of binding on DNA microarrays: Understanding the combined effect of probe synthesis failure, cross-hybridization, DNA fragmentation and other experimental details of affymetrix arrays

    Jakubek, Y. A. & Cutler, D. J., Dec 27 2012, In: BMC genomics. 13, 1, 737.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    8 Scopus citations

  • A modified host cell reactivation assay to measure DNA repair capacity for removing 4-aminobiphenyl adducts: A pilot study of bladder cancer

    Lin, J., Kadlubar, F. F., Spitz, M. R., Zhao, H. & Wu, X., Jul 2005, In: Cancer Epidemiology Biomarkers and Prevention. 14, 7, p. 1832-1836 5 p.

    Research output: Contribution to journal › Article › peer-review

    23 Scopus citations

  • A modified host-cell reactivation assay to measure repair of alkylating DNA damage for assessing risk of lung adenocarcinoma

    Wang, L., Wei, Q., Shi, Q., Guo, Z., Qiao, Y. & Spitz, M. R., Jul 2007, In: Carcinogenesis. 28, 7, p. 1430-1436 7 p.

    Research output: Contribution to journal › Article › peer-review

    19 Scopus citations

  • A molecular docking study of anticancer drug paclitaxel and its analogues

    Sinha, R., Vidyarthi, A. S. & Shankaracharya, S., Apr 2011, In: Indian Journal of Biochemistry and Biophysics. 48, 2, p. 101-105 5 p.

    Research output: Contribution to journal › Article › peer-review

    7 Scopus citations

  • Amolecular risk score based on 4 functional pathways for advanced classical Hodgkin lymphoma

    Sánchez-Espiridión, B., Montalbán, C., López, Á., Menárguez, J., Sabín, P., Ruiz-Marcellán, C., Lopez, A., Ramos, R., Rodríguez, J., Cánovas, A., Camarero, C., Canales, M., Alves, J., Arranz, R., Acevedo, A., Salar, A., Serrano, S., Bas, Á., Moraleda, J. M., Sánchez-Godoy, P., & 17 othersBurgos, F., Rayón, C., Fresno, M. F., Laraña, J. G., García-Cosío, M., Santonja, C., López, J. L., Llanos, M., Mollejo, M., Gonzá Lez-Carrero, J., Marín, A., Forteza, J., García-Sanz, R., Tomás, J. F., Morente, M. M., Piris, M. A. & García, J. F., Aug 26 2010, In: Blood. 116, 8, p. e12-e17

    Research output: Contribution to journal › Article › peer-review

    45 Scopus citations

  • A multiplexed, particle-based flow cytometric assay identified plasma matrix metalloproteinase-7 to be associated with cancer-related death among patients with bladder cancer

    Svatek, R. S., Shah, J. B., Xing, J., Chang, D., Lin, J., McConkey, D. J., Wu, X. & Dinney, C. P., Oct 1 2010, In: Cancer. 116, 19, p. 4513-4519 7 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    29 Scopus citations

  • A multi-stage genome-wide association study of bladder cancer identifies multiple susceptibility loci

    Rothman, N., Garcia-Closas, M., Chatterjee, N., Malats, N., Wu, X., Figueroa, J. D., Real, F. X., Van Den Berg, D., Matullo, G., Baris, D., Thun, M., Kiemeney, L. A., Vineis, P., De Vivo, I., Albanes, D., Purdue, M. P., Rafnar, T., Hildebrandt, M. A. T., Kiltie, A. E., Cussenot, O., & 90 othersGolka, K., Kumar, R., Taylor, J. A., Mayordomo, J. I., Jacobs, K. B., Kogevinas, M., Hutchinson, A., Wang, Z., Fu, Y. P., Prokunina-Oolsson, L., BurdeT, L., Yeager, M., Wheeler, W., Tardón, A., Serra, C., Carrato, A., García-Cclosas, R., Loreta, J., Johnson, A., Schwenn, M., Karagas, M. R., Schned, A., Andriole, G., Grubb, R., Black, A., Jacobs, E. J., Diver, W. R., Gapstur, S. M., Weinstein, S. J., Virtamo, J., Cortessis, V. K., Gago-Dominguez, M., Pike, M. C., Stern, M. C., Yuan, J. M., Hunter, D. J., McGgrath, M., Dinney, C. P., Czerniak, B., Chen, M., Yang, H., Vermeulen, S. H., Aben, K. K., Witjes, J. A., MaKinje, R. R., Sulem, P., Besenbacher, S., Stefansson, K., Riboli, E., Brennan, P., Panico, S., Navarro, C., Allen, N. E., Bueno-De-Mesquita, H. B., Trichopoulos, D., Caporaso, N., Landi, M. T., Canzian, F., Ljungberg, B., Tjonneland, A., Clavel-Chapelon, F., Bishop, D. T., Teo, M. T. W., Knowles, M. A., Guarrera, S., Polidoro, S., Ricceri, F., Sacerdote, C., Allione, A., Cancel-Tassin, G., Selinski, S., Hengstler, J. G., Dietrich, H., Fletcher, T., Rudnai, P., Gurzau, E., Koppova, K., Bolick, S. C. E., Godfrey, A., Xu, Z., Sanz-Velez, J. I., Prats, M. D. G., Sanchez, M., Valdivia, G., Porru, S., Benhamou, S., Hoover, R. N., Fraumeni, J. F., Silverman, D. T. & Chanock, S. J., Nov 1 2010, In: Nature Genetics. 42, 11, p. 978-984 7 p.

    Research output: Contribution to journal › Article › peer-review

    358 Scopus citations

  • A myeloperoxidase polymorphism associated with reduced risk of lung cancer

    Schabath, M. B., Spitz, M. R., Hong, W. K., Delclos, G. L., Reynolds, W. F., Gunn, G. B., Whitehead, L. W. & Wu, X., 2002, In: Lung Cancer. 37, 1, p. 35-40 6 p.

    Research output: Contribution to journal › Article › peer-review

    84 Scopus citations

  • An advanced histologic method for evaluation of intestinal adenomas in mice using digital slides

    Davis, J. S., Gupta, V., Gagea, M. & Wu, X., Mar 2016, In: PloS one. 11, 3, e0151463.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    1 Scopus citations

  • Analysis of aromatic DNA adducts and 7,8-dihydro-8-oxo-2'-deoxyguanosine in lymphocyte DNA from a case-control study of lung cancer involving minority populations

    Vulimiri, S. V., Wu, X., Baer-Dubowska, W., De Andrade, M., Detry, M., Spitz, M. R. & DiGiovanni, J., 2000, In: Molecular Carcinogenesis. 27, 1, p. 34-46 13 p.

    Research output: Contribution to journal › Article › peer-review

    69 Scopus citations

  • Analysis of Genomes and Transcriptomes of Hepatocellular Carcinomas Identifies Mutations and Gene Expression Changes in the Transforming Growth Factor-β Pathway

    Chen, J., Zaidi, S., Rao, S., Chen, J. S., Phan, L., Farci, P., Su, X., Shetty, K., White, J., Zamboni, F., Wu, X., Rashid, A., Pattabiraman, N., Mazumder, R., Horvath, A., Wu, R. C., Li, S., Xiao, C., Deng, C. X., Wheeler, D. A., & 3 othersMishra, B., Akbani, R. & Mishra, L., Jan 2018, In: Gastroenterology. 154, 1, p. 195-210 16 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    102 Scopus citations

  • Analysis of heritability and genetic architecture of pancreatic cancer: A PANC4 study

    Chen, F., Childs, E. J., Mocci, E., Bracci, P., Gallinger, S., Li, D., Neale, R. E., Olson, S. H., Scelo, G., Bamlet, W. R., Blackford, A. L., Borges, M., Brennan, P., Chaffee, K. G., Duggal, P., Hassan, M. J., Holly, E. A., Hung, R. J., Goggins, M. G., Kurtz, R. C., & 6 othersOberg, A. L., Orlow, I., Yu, H., Petersen, G. M., Risch, H. A. & Klein, A. P., 2019, In: Cancer Epidemiology Biomarkers and Prevention. 28, 7, p. 1238-1245 8 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    48 Scopus citations

  • Analysis of heritability and shared heritability based on genome-wide association studies for thirteen cancer types

    Sampson, J. N., Wheeler, W. A., Yeager, M., Panagiotou, O., Wang, Z., Berndt, S. I., Lan, Q., Abnet, C. C., Amundadottir, L. T., Figueroa, J. D., Landi, M. T., Mirabello, L., Savage, S. A., Taylor, P. R., De Vivo, I., McGlynn, K. A., Purdue, M. P., Rajaraman, P., Adami, H. O., Ahlbom, A., & 388 othersAlbanes, D., Amary, M. F., An, S. J., Andersson, U., Andriole, G., Andrulis, I. L., Angelucci, E., Ansell, S. M., Arici, C., Armstrong, B. K., Arslan, A. A., Austin, M. A., Baris, D., Barkauskas, D. A., Bassig, B. A., Becker, N., Benavente, Y., Benhamou, S., Berg, C., Van Den Berg, D., Bernstein, L., Bertrand, K. A., Birmann, B. M., Black, A., Boeing, H., Boffetta, P., Boutron-Ruault, M. C., Bracci, P. M., Brinton, L., Brooks-Wilson, A. R., Bueno-De-Mesquita, H. B., Burdett, L., Buring, J., Butler, M. A., Cai, Q., Cancel-Tassin, G., Canzian, F., Carrato, A., Carreon, T., Carta, A., Chan, J. K. C., Chang, E. T., Chang, G. C., Chang, I. S., Chang, J., Chang-Claude, J., Chen, C. J., Chen, C. Y., Chen, C., Chen, C. H., Chen, C., Chen, H., Chen, K., Chen, K. Y., Chen, K. C., Chen, Y., Chen, Y. H., Chen, Y. S., Chen, Y. M., Chien, L. H., Chirlaque, M. D., Choi, J. E., Choi, Y. Y., Chow, W. H., Chung, C. C., Clavel, J., Clavel-Chapelon, F., Cocco, P., Colt, J. S., Comperat, E., Conde, L., Connors, J. M., Conti, D., Cortessis, V. K., Cotterchio, M., Cozen, W., Crouch, S., Crous-Bou, M., Cussenot, O., Davis, F. G., Ding, T., Diver, W. R., Dorronsoro, M., Dossus, L., Duell, E. J., Ennas, M. G., Erickson, R. L., Feychting, M., Flanagan, A. M., Foretova, L., Fraumeni, J. F., Freedman, N. D., Freeman, L. E. B., Fuchs, C., Gago-Dominguez, M., Gallinger, S., Gao, Y. T., Gapstur, S. M., Garcia-Closas, M., García-Closas, R., Gascoyne, R. D., Gastier-Foster, J., Gaudet, M. M., Gaziano, J. M., Giffen, C., Giles, G. G., Giovannucci, E., Glimelius, B., Goggins, M., Gokgoz, N., Goldstein, A. 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S., La Croix, A., Lawrence, C., Lecanda, F., Lee, V. H. F., Li, D., Li, H., Li, J., Li, Y. J., Li, Y., Liao, L. M., Liebow, M., Lightfoot, T., Lim, W. Y., Lin, C. C., Lin, D., Lindstrom, S., Linet, M. S., Link, B. K., Liu, C., Liu, J., Liu, L., Ljungberg, B., Lloreta, J., Di Lollo, S., Lu, D., Lund, E., Malats, N., Mannisto, S., Marchand, L. L., Marina, N., Masala, G., Mastrangelo, G., Matsuo, K., Maynadie, M., McKay, J., McKean-Cowdin, R., Melbye, M., Melin, B. S., Michaud, D. S., Mitsudomi, T., Monnereau, A., Montalvan, R., Moore, L. E., Mortensen, L. M., Nieters, A., North, K. E., Novak, A. J., Oberg, A. L., Offit, K., Oh, I. J., Olson, S. H., Palli, D., Pao, W., Park, I. K., Park, J. Y., Park, K. H., Patiño-Garcia, A., Pavanello, S., Peeters, P. H. M., Perng, R. P., Peters, U., Petersen, G. M., Picci, P., Pike, M. C., Porru, S., Prescott, J., Prokunina-Olsson, L., Qian, B., Qiao, Y. L., Rais, M., Riboli, E., Riby, J., Risch, H. 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    Research output: Contribution to journal › Article › peer-review

    Open Access
    126 Scopus citations

  • Analysis of risk factors and survival in pediatric high-grade spinal cord astrocytoma: A population-based study

    Lam, S., Lin, Y. & Melkonian, S., Aug 2013, In: Pediatric Neurosurgery. 48, 5, p. 299-305 7 p.

    Research output: Contribution to journal › Article › peer-review

    33 Scopus citations

  • Analysis of survival in pediatric high-grade brainstem gliomas: A population-based study

    Lam, S., Lin, Y., Auffinger, B. & Melkonian, S., Jul 1 2015, In: Journal of Pediatric Neurosciences. 10, 3, p. 199-206 8 p.

    Research output: Contribution to journal › Article › peer-review

    12 Scopus citations

  • Analysis of the disulfide bonding pattern between domain sequences of recombinant prochymosin solubilized from inclusion bodies

    Wei, C., Chen, H., Zhang, Y. & Yang, K., 2000, In: Protein Journal. 19, 4, p. 277-284 8 p.

    Research output: Contribution to journal › Article › peer-review

    6 Scopus citations

  • Analysis of the mutational landscape of classic Hodgkin lymphoma identifies disease heterogeneity and potential therapeutic targets

    Mata, E., Díaz-López, A., Martín-Moreno, A. M., Sánchez-Beato, M., Varela, I., Mestre, M. J., Santonja, C., Burgos, F., Menárguez, J., Estévez, M., Provencio, M., Sánchez-Espiridión, B., Díaz, E., Montalbán, C., Piris, M. A. & García, J. F., 2017, In: Oncotarget. 8, 67, p. 111386-111395 10 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    27 Scopus citations

  • An analysis of DNA repair as a determinant of survival in patients with non-small-cell lung cancer

    Bosken, C. H., Wei, Q., Amos, C. I. & Spitz, M. R., Jul 17 2002, In: Journal of the National Cancer Institute. 94, 14, p. 1091-1099 9 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    165 Scopus citations

  • An analysis of single nucleotide polymorphisms of 125 DNA repair genes in the Texas genome-wide association study of lung cancer with a replication for the XRCC4 SNPs

    Yu, H., Zhao, H., Wang, L. E., Han, Y., Chen, W. V., Amos, C. I., Rafnar, T., Sulem, P., Stefansson, K., Landi, M. T., Caporaso, N., Albanes, D., Thun, M., McKay, J. D., Brennan, P., Wang, Y., Houlston, R. S., Spitz, M. R. & Wei, Q., Apr 3 2011, In: DNA Repair. 10, 4, p. 398-407 10 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    27 Scopus citations

  • An association between a NQO1 genetic polymorphism and risk of lung cancer

    Saldivar, S. J., Wang, Y., Zhao, H., Shao, L., Lin, J., Spitz, M. R. & Wu, X., Apr 4 2005, In: Mutation Research - Genetic Toxicology and Environmental Mutagenesis. 582, 1-2, p. 71-78 8 p.

    Research output: Contribution to journal › Article › peer-review

    37 Scopus citations

  • An association between NQO1 genetic polymorphism and risk of bladder cancer

    Park, S. J., Zhao, H., Spitz, M. R., Grossman, H. B. & Wu, X., Apr 20 2003, In: Mutation Research - Genetic Toxicology and Environmental Mutagenesis. 536, 1-2, p. 131-137 7 p.

    Research output: Contribution to journal › Article › peer-review

    81 Scopus citations

  • An atlas of epithelial cell states and plasticity in lung adenocarcinoma

    Han, G., Sinjab, A., Rahal, Z., Lynch, A. M., Treekitkarnmongkol, W., Liu, Y., Serrano, A. G., Feng, J., Liang, K., Khan, K., Lu, W., Hernandez, S. D., Liu, Y., Cao, X., Dai, E., Pei, G., Hu, J., Abaya, C., Gomez-Bolanos, L. I., Peng, F., & 18 othersChen, M., Parra, E. R., Cascone, T., Sepesi, B., Moghaddam, S. J., Scheet, P., Negrao, M. V., Heymach, J. V., Li, M., Dubinett, S. M., Stevenson, C. S., Spira, A. E., Fujimoto, J., Solis, L. M., Wistuba, I. I., Chen, J., Wang, L. & Kadara, H., Mar 21 2024, In: Nature. 627, 8004, p. 656-663 8 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access

  • Androgen receptor polymorphisms and risk of biochemical failure among prostatectomy patients

    Strom, S. S., Gu, Y., Zhang, H., Troncoso, P., Babaian, R. J., Pettaway, C. A., Shete, S., Spitz, M. R. & Logothetis, C. J., Sep 1 2004, In: Prostate. 60, 4, p. 343-351 9 p.

    Research output: Contribution to journal › Article › peer-review

    29 Scopus citations

  • A NEIL1 single nucleotide polymorphism (rs4462560) predicts the risk of radiation-induced toxicities in esophageal cancer patients treated with definitive radiotherapy

    Chen, Y., Zhu, M., Zhang, Z., Jiang, G., Fu, X., Fan, M., Sun, M., Wei, Q. & Zhao, K., Dec 1 2013, In: Cancer. 119, 23, p. 4205-4211 7 p.

    Research output: Contribution to journal › Article › peer-review

    24 Scopus citations

  • An epidemiologic study of early onset lung cancer

    Etzel, C. J., Lu, M., Merriman, K., Liu, M., Vaporciyan, A. & Spitz, M. R., May 2006, In: Lung Cancer. 52, 2, p. 129-134 6 p.

    Research output: Contribution to journal › Article › peer-review

    40 Scopus citations

  • A nested case-control study of leukocyte mitochondrial DNA copy number and renal cell carcinoma in the Prostate, Lung, Colorectal and Ovarian Cancer Screening Trial

    Hofmann, J. N., Hosgood, H. D., Liu, C. S., Chow, W. H., Shuch, B., Cheng, W. L., Lin, T. T., Moore, L. E., Lan, Q., Rothman, N. & Purdue, M. P., Apr 2014, In: Carcinogenesis. 35, 5, p. 1028-1031 4 p.

    Research output: Contribution to journal › Article › peer-review

    41 Scopus citations

  • An Evolutionary Perspective on Single-Nucleotide Polymorphism Screening in Molecular Cancer Epidemiology

    Zhu, Y., Spitz, M. R., Amos, C. I., Lin, J., Schabath, M. B. & Wu, X., Mar 15 2004, In: Cancer Research. 64, 6, p. 2251-2257 7 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    90 Scopus citations

  • A newly identified susceptibility locus near FOXP1 modifies the association of gastroesophageal reflux with Barrett's esophagus

    Dai, J. Y., De Dieu Tapsoba, J., Buas, M. F., Onstad, L. E., Levine, D. M., Risch, H. A., Chow, W. H., Bernstein, L., Ye, W., Lagergren, J., Bird, N. C., Corley, D. A., Shaheen, N. J., Wu, A. H., Reid, B. J., Hardie, L. J., Whiteman, D. C. & Vaughan, T. L., Nov 2015, In: Cancer Epidemiology Biomarkers and Prevention. 24, 11, p. 1739-1747 9 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    20 Scopus citations

  • An examination of burnout predictors: Understanding the influence of job attitudes and environment

    Cavanaugh, K. J., Lee, H. Y., Daum, D., Chang, S., Izzo, J. G., Kowalski, A. & Holladay, C. L., 2020, In: Healthcare (Switzerland). 8, 4, 502.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    10 Scopus citations

  • An examination of male and female odds ratios by BMI, cigarette smoking, and alcohol consumption for cancers of the oral cavity, pharynx, and larynx in pooled data from 15 case-control studies

    Lubin, J. H., Muscat, J., Gaudet, M. M., Olshan, A. F., Curado, M. P., Dal Maso, L., Wünsch-Filho, V., Sturgis, E. M., Szeszenia-Dabrowska, N., Castellsague, X., Zhang, Z. F., Smith, E., Fernandez, L., Matos, E., Franceschi, S., Fabianova, E., Rudnai, P., Purdue, M. P., Mates, D., Wei, Q., & 22 othersHerrero, R., Kelsey, K., Morgenstern, H., Shangina, O., Koifman, S., Lissowska, J., Levi, F., Daudt, A. W., Neto, J. E., Chen, C., Lazarus, P., Winn, D. M., Schwartz, S. M., Boffetta, P., Brennan, P., Menezes, A., Vecchia, C. L., McClean, M., Talamini, R., Rajkumar, T., Hayes, R. B. & Hashibe, M., Sep 2011, In: Cancer Causes and Control. 22, 9, p. 1217-1231 15 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    47 Scopus citations

  • An expanded risk prediction model for lung cancer

    Spitz, M. R., Etzel, C. J., Dong, Q., Amos, C. I., Wei, Q., Wu, X. & Hong, W. K., Sep 2008, In: Cancer Prevention Research. 1, 4, p. 250-254 5 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    128 Scopus citations

  • Angiogenin/Ribonuclease 5 Is an EGFR Ligand and a Serum Biomarker for Erlotinib Sensitivity in Pancreatic Cancer

    Wang, Y. N., Lee, H. H., Chou, C. K., Yang, W. H., Wei, Y., Chen, C. T., Yao, J., Hsu, J. L., Zhu, C., Ying, H., Ye, Y., Wang, W. J., Lim, S. O., Xia, W., Ko, H. W., Liu, X., Liu, C. G., Wu, X., Wang, H., Li, D., & 9 othersPrakash, L. R., Katz, M. H., Kang, Y., Kim, M., Fleming, J. B., Fogelman, D., Javle, M., Maitra, A. & Hung, M. C., Apr 9 2018, In: Cancer cell. 33, 4, p. 752-769.e8

    Research output: Contribution to journal › Article › peer-review

    Open Access
    51 Scopus citations

  • An intronic poly (AT) polymorphism of the DNA repair gene XPC and risk of squamous cell carcinoma of the head and neck: A case-control study

    Shen, H., Sturgis, E. M., Khan, S. G., Qiao, Y., Shahlavi, T., Eicher, S. A., Xu, Y., Wang, X., Strom, S. S., Spitz, M. R., Kraemer, K. H. & Wei, Q., Apr 15 2001, In: Cancer Research. 61, 8, p. 3321-3325 5 p.

    Research output: Contribution to journal › Article › peer-review

    115 Scopus citations

  • An investigation of risk factors for renal cell carcinoma by histologic subtype in two case-control studies

    Purdue, M. P., Moore, L. E., Merino, M. J., Boffetta, P., Colt, J. S., Schwartz, K. L., Bencko, V., Davis, F. G., Graubard, B. I., Janout, V., Ruterbusch, J. J., Beebe-Dimmer, J., Cote, M. L., Shuch, B., Mates, D., Hofmann, J. N., Foretova, L., Rothman, N., Szeszenia-Dabrowska, N., Matveev, V., & 5 othersWacholder, S., Zaridze, D., Linehan, W. M., Brennan, P. & Chow, W. H., Jun 1 2013, In: International journal of cancer. 132, 11, p. 2640-2647 8 p.

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    Open Access
    65 Scopus citations

  • An miR-502-binding site single-nucleotide polymorphism in the 3′-untranslated region of the SET8 gene is associated with early age of breast cancer onset

    Song, F., Zheng, H., Liu, B., Wei, S., Dai, H., Zhang, L., Calin, G. A., Hao, X., Wei, Q., Zhang, W. & Chen, K., Oct 1 2009, In: Clinical Cancer Research. 15, 19, p. 6292-6300 9 p.

    Research output: Contribution to journal › Article › peer-review

    106 Scopus citations

  • A nonsynonymous single-nucleotide polymorphism in the PDZ-Rho guanine nucleotide exchange factor (Ser1416Gly) modulates the risk of lung cancer in Mexican Americans

    Gu, J., Wu, X., Dong, Q., Romeo, M. J., Lin, X., Gutkind, J. S. & Berman, D. M., Jun 15 2006, In: Cancer. 106, 12, p. 2707-2715 9 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    18 Scopus citations