Christopher Bristow

Institute Group Leader

    Calculated based on number of publications stored in Pure and citations from Scopus
    20052023

    Research activity per year

    Search results

    • 4-1BB agonist focuses CD8+ tumor-infiltrating T-Cell growth into a distinct repertoire capable of tumor recognition in pancreatic cancer

      Sakellariou-Thompson, D., Forget, M. A., Creasy, C., Bernard, V., Zhao, L., Kim, Y. U., Hurd, M. W., Uraoka, N., Parra, E. R., Kang, Y., Bristow, C. A., Rodriguez-Canales, J., Fleming, J. B., Varadhachary, G., Javle, M., Overman, M. J., Alvarez, H. A., Heffernan, T. P., Zhang, J., Hwu, P., & 3 othersMaitra, A., Haymaker, C. & Bernatchez, C., Dec 1 2017, In: Clinical Cancer Research. 23, 23, p. 7263-7275 13 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      41 Scopus citations
    • A cis-regulatory map of the Drosophila genome

      Négre, N., Brown, C. D., Ma, L., Bristow, C. A., Miller, S. W., Wagner, U., Kheradpour, P., Eaton, M. L., Loriaux, P., Sealfon, R., Li, Z., Ishii, H., Spokony, R. F., Chen, J., Hwang, L., Cheng, C., Auburn, R. P., Davis, M. B., Domanus, M., Shah, P. K., & 20 othersMorrison, C. A., Zieba, J., Suchy, S., Senderowicz, L., Victorsen, A., Bild, N. A., Grundstad, A. J., Hanley, D., MacAlpine, D. M., Mannervik, M., Venken, K., Bellen, H., White, R., Gerstein, M., Russell, S., Grossman, R. L., Ren, B., Posakony, J. W., Kellis, M. & White, K. P., Mar 24 2011, In: Nature. 471, 7339, p. 527-531 5 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      398 Scopus citations
    • A Combinatorial Code for Pattern Formation in Drosophila Oogenesis

      Yakoby, N., Bristow, C. A., Gong, D., Schafer, X., Lembong, J., Zartman, J. J., Halfon, M. S., Schüpbach, T. & Shvartsman, S. Y., Nov 11 2008, In: Developmental cell. 15, 5, p. 725-737 13 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      57 Scopus citations
    • A functional genomic approach to actionable gene fusions for precision oncology

      Li, J., Lu, H., Ng, P. K. S., Pantazi, A., Ip, C. K. M., Jeong, K. J., Amador, B., Tran, R., Tsang, Y. H., Yang, L., Song, X., Dogruluk, T., Ren, X., Hadjipanayis, A., Bristow, C. A., Lee, S., Kucherlapati, M., Parfenov, M., Tang, J., Seth, S., & 17 othersMahadeshwar, H. S., Mojumdar, K., Zeng, D., Zhang, J., Protopopov, A., Seidman, J. G., Creighton, C. J., Lu, Y., Sahni, N., Shaw, K. R., Meric-Bernstam, F., Futreal, A., Chin, L., Scott, K. L., Kucherlapati, R., Mills, G. B. & Liang, H., Feb 2022, In: Science Advances. 8, 6, abm2382.

      Research output: Contribution to journalArticlepeer-review

      7 Scopus citations
    • A functional genomic screen in vivo identifies CEACAM5 as a clinically relevant driver of breast cancer metastasis

      Powell, E., Shao, J., Picon, H. M., Bristow, C., Ge, Z., Peoples, M., Robinson, F., Jeter-Jones, S. L., Schlosberg, C., Grzeskowiak, C. L., Yang, F., Wu, Y., Wistuba, I., Moulder, S., Symmans, W. F., Scott, K. L., Edwards, J. R., Liang, H., Heffernan, T. P. & Piwnica-Worms, H., Dec 1 2018, In: npj Breast Cancer. 4, 1, 9.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      30 Scopus citations
    • Allosteric SHP2 inhibitor, IACS-13909, overcomes EGFR-dependent and EGFR-independent resistance mechanisms toward osimertinib

      Sun, Y., Meyers, B. A., Czako, B., Leonard, P., Mseeh, F., Harris, A. L., Wu, Q., Johnson, S., Parker, C. A., Cross, J. B., Di Francesco, M. E., Bivona, B. J., Bristow, C. A., Burke, J. P., Carrillo, C. C., Carroll, C. L., Chang, Q., Feng, N., Gao, G., Gera, S., & 25 othersGiuliani, V., Huang, J. K., Jiang, Y., Kang, Z., Kovacs, J. J., Liu, C. Y., Lopez, A. M., Ma, X., Mandal, P. K., McAfoos, T., Miller, M. A., Mullinax, R. A., Peoples, M., Ramamoorthy, V., Seth, S., Spencer, N. D., Suzuki, E., Williams, C. C., Yu, S. S., Zuniga, A. M., Draetta, G. F., Marszalek, J. R., Heffernan, T. P., Kohl, N. E. & Jones, P., Nov 1 2020, In: Cancer Research. 80, 21, p. 4840-4853 14 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      47 Scopus citations
    • Analyzing Somatic Genome Rearrangements in Human Cancers by Using Whole-Exome Sequencing

      Yang, L., Lee, M. S., Lu, H., Oh, D. Y., Kim, Y. J., Park, D., Park, G., Ren, X., Bristow, C. A., Haseley, P. S., Lee, S., Pantazi, A., Kucherlapati, R., Park, W. Y., Scott, K. L., Choi, Y. L. & Park, P. J., May 5 2016, In: American journal of human genetics. 98, 5, p. 843-856 14 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      30 Scopus citations
    • An inhibitor of oxidative phosphorylation exploits cancer vulnerability

      Molina, J. R., Sun, Y., Protopopova, M., Gera, S., Bandi, M., Bristow, C., McAfoos, T., Morlacchi, P., Ackroyd, J., Agip, A. N. A., Al-Atrash, G., Asara, J., Bardenhagen, J., Carrillo, C. C., Carroll, C., Chang, E., Ciurea, S., Cross, J. B., Czako, B., Deem, A., & 46 othersDaver, N., De Groot, J. F., Dong, J. W., Feng, N., Gao, G., Gay, J., Do, M. G., Greer, J., Giuliani, V., Han, J., Han, L., Henry, V. K., Hirst, J., Huang, S., Jiang, Y., Kang, Z., Khor, T., Konoplev, S., Lin, Y. H., Liu, G., Lodi, A., Lofton, T., Ma, H., Mahendra, M., Matre, P., Mullinax, R., Peoples, M., Petrocchi, A., Rodriguez-Canale, J., Serreli, R., Shi, T., Smith, M., Tabe, Y., Theroff, J., Tiziani, S., Xu, Q., Zhang, Q., Muller, F., Depinho, R. A., Toniatti, C., Draetta, G. F., Heffernan, T. P., Konopleva, M., Jones, P., Di Francesco, M. E. & Marszalek, J. R., Jul 1 2018, In: Nature medicine. 24, 7, p. 1036-1046 11 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      553 Scopus citations
    • A Pan-Cancer Compendium of Genes Deregulated by Somatic Genomic Rearrangement across More Than 1,400 Cases

      Zhang, Y., Yang, L., Kucherlapati, M., Chen, F., Hadjipanayis, A., Pantazi, A., Bristow, C. A., Lee, E. A., Mahadeshwar, H. S., Tang, J., Zhang, J., Seth, S., Lee, S., Ren, X., Song, X., Sun, H., Seidman, J., Luquette, L. J., Xi, R., Chin, L., & 5 othersProtopopov, A., Li, W., Park, P. J., Kucherlapati, R. & Creighton, C. J., Jul 10 2018, In: Cell Reports. 24, 2, p. 515-527 13 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      61 Scopus citations
    • A Pan-Cancer Proteogenomic Atlas of PI3K/AKT/mTOR Pathway Alterations

      Zhang, Y., Kwok-Shing Ng, P., Kucherlapati, M., Chen, F., Liu, Y., Tsang, Y. H., de Velasco, G., Jeong, K. J., Akbani, R., Hadjipanayis, A., Pantazi, A., Bristow, C. A., Lee, E., Mahadeshwar, H. S., Tang, J., Zhang, J., Yang, L., Seth, S., Lee, S., Ren, X., & 22 othersSong, X., Sun, H., Seidman, J., Luquette, L. J., Xi, R., Chin, L., Protopopov, A., Westbrook, T. F., Shelley, C. S., Choueiri, T. K., Ittmann, M., Van Waes, C., Weinstein, J. N., Liang, H., Henske, E. P., Godwin, A. K., Park, P. J., Kucherlapati, R., Scott, K. L., Mills, G. B., Kwiatkowski, D. J. & Creighton, C. J., Jun 12 2017, In: Cancer cell. 31, 6, p. 820-832.e3

      Research output: Contribution to journalArticlepeer-review

      Open Access
      382 Scopus citations
    • Cad74A is regulated by BR and is required for robust dorsal appendage formation in Drosophila oogenesis

      Zartman, J. J., Yakoby, N., Bristow, C. A., Zhou, X., Schlichting, K., Dahmann, C. & Shvartsman, S. Y., Oct 15 2008, In: Developmental Biology. 322, 2, p. 289-301 13 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      16 Scopus citations
    • Cell fate determination by multiple signaling pathways: Genome-wide analysis and modeling of pattern formation in Drosophila egg development

      Yakoby, N., Bristow, C. A., Kalifa, R., Schupbach, G. & Shvartsman, S., 2005, p. 9242. 1 p.

      Research output: Contribution to conferencePaperpeer-review

    • Characterization of HPV and host genome interactions in primary head and neck cancers

      The Cancer Genome Atlas Network, Oct 28 2014, In: Proceedings of the National Academy of Sciences of the United States of America. 111, 43, p. 15544-15549 6 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      280 Scopus citations
    • Combined inhibition of DDR1 and CDK4/6 induces synergistic effects in ER-positive, HER2-negative breast cancer with PIK3CA/AKT1 mutations

      Shariati, M., Evans, K. W., Zheng, X., Bristow, C. A., Ng, P. K. S., Rizvi, Y. Q., Tapia, C., Yang, F., Carugo, A., Heffernan, T. P., Peoples, M. D., Tripathy, D. & Meric-Bernstam, F., Jul 1 2021, In: Oncogene. 40, 26, p. 4425-4439 15 p.

      Research output: Contribution to journalArticlepeer-review

      9 Scopus citations
    • Complex I inhibitor of oxidative phosphorylation in advanced solid tumors and acute myeloid leukemia: phase I trials

      Yap, T. A., Daver, N., Mahendra, M., Zhang, J., Kamiya-Matsuoka, C., Meric-Bernstam, F., Kantarjian, H. M., Ravandi, F., Collins, M. E., Francesco, M. E. D., Dumbrava, E. E., Fu, S., Gao, S., Gay, J. P., Gera, S., Han, J., Hong, D. S., Jabbour, E. J., Ju, Z., Karp, D. D., & 29 othersLodi, A., Molina, J. R., Baran, N., Naing, A., Ohanian, M., Pant, S., Pemmaraju, N., Bose, P., Piha-Paul, S. A., Rodon, J., Salguero, C., Sasaki, K., Singh, A. K., Subbiah, V., Tsimberidou, A. M., Xu, Q. A., Yilmaz, M., Zhang, Q., Li, Y., Bristow, C. A., Bhattacharjee, M. B., Tiziani, S., Heffernan, T. P., Vellano, C. P., Jones, P., Heijnen, C. J., Kavelaars, A., Marszalek, J. R. & Konopleva, M., Jan 2023, In: Nature medicine. 29, 1, p. 115-126 12 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      63 Scopus citations
    • Comprehensive, integrative genomic analysis of diffuse lower-grade gliomas

      Brat, D. J., Verhaak, R., Aldape, K. D., Yung, W. K. A., Salama, S. R., Cooper, L. A. D., Rheinbay, E., Miller, C. R., Vitucci, M., Morozova, O., Robertson, A. G., Noushmehr, H., Laird, P. W., Cherniack, A. D., Akbani, R., Huse, J. T., Ciriello, G., Poisson, L. M., Barnholtz-Sloan, J. S., Berger, M. S., & 287 othersBrennan, C., Colen, R., Colman, H., Flanders, A. E., Giannini, C., Grifford, M., Iavarone, A., Jain, R., Joseph, I., Kim, J., Kasaian, K., Mikkelsen, T., Murray, B. A., O'Neill, B. P., Pachter, L., Parsons, D. W., Sougnez, C., Sulman, E. P., Vandenberg, S. R., Van Meir, E. G., Von Deimling, A., Zhang, H., Crain, D., Lau, K., Mallery, D., Morris, S., Paulauskis, J., Penny, R., Shelton, T., Sherman, M., Yena, P., Black, A., Bowen, J., Dicostanzo, K., Gastier-Foster, J., Leraas, K. M., Lichtenberg, T. M., Pierson, C. R., Ramirez, N. C., Taylor, C., Weaver, S., Wise, L., Zmuda, E., Davidsen, T., Demchok, J. A., Eley, G., Ferguson, M. L., Hutter, C. M., Shaw, K. R. M., Ozenberger, B. A., Sheth, M., Sofia, H. J., Tarnuzzer, R., Wang, Z., Yang, L., Zenklusen, J. C., Ayala, B., Baboud, J., Chudamani, S., Jensen, M. A., Liu, J., Pihl, T., Raman, R., Wan, Y., Wu, Y., Ally, A., Auman, J. T., Balasundaram, M., Balu, S., Baylin, S. B., Beroukhim, R., Bootwalla, M. S., Bowlby, R., Bristow, C. A., Brooks, D., Butterfield, Y., Carlsen, R., Carter, S., Chin, L., Chu, A., Chuah, E., Cibulskis, K., Clarke, A., Coetzee, S. G., Dhalla, N., Fennell, T., Fisher, S., Gabriel, S., Getz, G., Gibbs, R., Guin, R., Hadjipanayis, A., Hayes, D. N., Hinoue, T., Hoadley, K., Holt, R. A., Hoyle, A. P., Jefferys, S. R., Jones, S., Jones, C. D., Kucherlapati, R., Lai, P. H., Lander, E., Lee, S., Lichtenstein, L., Ma, Y., Maglinte, D. T., Mahadeshwar, H. S., Marra, M. A., Mayo, M., Meng, S., Meyerson, M. L., Mieczkowski, P. A., Moore, R. A., Mose, L. E., Mungall, A. J., Pantazi, A., Parfenov, M., Park, P. J., Parker, J. S., Perou, C. M., Protopopov, A., Ren, X., Roach, J., Sabedot, T. S., Schein, J., Schumacher, S. E., Seidman, J. G., Seth, S., Shen, H., Simons, J. V., Sipahimalani, P., Soloway, M. G., Song, X., Sun, H., Tabak, B., Tam, A., Tan, D., Tang, J., Thiessen, N., Triche, T., Van Den Berg, D. J., Veluvolu, U., Waring, S., Weisenberger, D. J., Wilkerson, M. D., Wong, T., Wu, J., Xi, L., Xu, A. W., Yang, L., Zack, T. I., Zhang, J., Aksoy, B. A., Arachchi, H., Benz, C., Bernard, B., Carlin, D., Cho, J., DiCara, D., Frazer, S., Fuller, G. N., Gao, J. J., Gehlenborg, N., Haussler, D., Heiman, D. I., Iype, L., Jacobsen, A., Ju, Z., Katzman, S., Kim, H., Knijnenburg, T., Kreisberg, R. B., Lawrence, M. S., Lee, W., Leinonen, K., Lin, P., Ling, S., Liu, W., Liu, Y., Liu, Y., Lu, Y., Mills, G. B., Ng, S., Noble, M. S., Paull, E., Rao, A., Reynolds, S., Saksena, G., Sanborn, Z., Sander, C., Schultz, N., Senbabaoglu, Y., Shen, R., Shmulevich, I., Sinha, R., Stuart, J., Sumer, S. O., Sun, Y., Tasman, N., Taylor, B. S., Voet, D., Weinhold, N., Weinstein, J. N., Yang, D., Yoshihara, K., Zheng, S., Zhang, W., Zou, L., Abel, T., Sadeghi, S., Cohen, M. L., Eschbacher, J., Hattab, E. M., Raghunathan, A., Schniederjan, M. J., Aziz, D., Barnett, G., Barrett, W., Bigner, D. D., Boice, L., Brewer, C., Calatozzolo, C., Campos, B., Carlotti, C. G., Chan, T. A., Cuppini, L., Curley, E., Cuzzubbo, S., Devine, K., DiMeco, F., Duell, R., Elder, J. B., Fehrenbach, A., Finocchiaro, G., Friedman, W., Fulop, J., Gardner, J., Hermes, B., Herold-Mende, C., Jungk, C., Kendler, A., Lehman, N. L., Lipp, E., Liu, O., Mandt, R., McGraw, M., Mclendon, R., McPherson, C., Neder, L., Nguyen, P., Noss, A., Nunziata, R., Ostrom, Q. T., Palmer, C., Perin, A., Pollo, B., Potapov, A., Potapova, O., Rathmell, W. K., Rotin, D., Scarpace, L., Schilero, C., Senecal, K., Shimmel, K., Shurkhay, V., Sifri, S., Singh, R., Sloan, A. E., Smolenski, K., Staugaitis, S. M., Steele, R., Thorne, L., Tirapelli, D. P. C., Unterberg, A., Vallurupalli, M., Wang, Y., Warnick, R., Williams, F., Wolinsky, Y., Bell, S., Rosenberg, M., Stewart, C., Huang, F., Grimsby, J. L., Radenbaugh, A. J. & Zhang, J., Jun 25 2015, In: New England Journal of Medicine. 372, 26, p. 2481-2498 18 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      2271 Scopus citations
    • Comprehensive genomic characterization of head and neck squamous cell carcinomas

      The Cancer Genome Atlas Network, Jan 29 2015, In: Nature. 517, 7536, p. 576-582 7 p.

      Research output: Contribution to journalArticlepeer-review

      2873 Scopus citations
    • Comprehensive molecular characterization of gastric adenocarcinoma

      Cancer Genome Atlas Research Network, Sep 11 2014, In: Nature. 513, 7517, p. 202-209 8 p.

      Research output: Contribution to journalArticlepeer-review

      4565 Scopus citations
    • Comprehensive molecular characterization of urothelial bladder carcinoma

      Weinstein, J. N., Akbani, R., Broom, B. M., Wang, W., Verhaak, R. G. W., McConkey, D., Lerner, S., Morgan, M., Creighton, C. J., Smith, C., Cherniack, A. D., Kim, J., Pedamallu, C. S., Noble, M. S., Al-Ahmadie, H. A., Reuter, V. E., Rosenberg, J. E., F.Bajorin, D., Bochner, B. H., Solit, D. B., & 273 othersKoppie, T., Robinson, B., Gordenin, D. A., Fargo, D., Klimczak, L. J., Roberts, S. A., Au, J., Laird, P. W., Hinoue, T., Schultz, N., Ramirez, R., Hansel, D., Hoadley, K. A., Kim, W. Y., Damrauer, J. S., Baylin, S. B., Mungall, A. J., Robertson, A. G., Chu, A., Kwiatkowski, D. J., Sougnez, C., Cibulskis, K., Lichtenstein, L., Sivachenko, A., Stewart, C., Lawrence, M. S., Getz, G., Lander, E., Gabrie, S. B., Donehower, L., Carter, S. L., Saksena, G., Schumacher, S. E., Freeman, S. S., Jung, J., Bhatt, A. S., Pugh, T., Beroukhim, R., Meyerson, M., Ally, A., Balasundaram, M., Butterfield, Y. S. N., Dhalla, N., Hirst, C., Holt, R. A., Jones, S. J. M., Lee, D., Li, H. I., Marra, M. A., Mayo, M., Moore, R. A., Schein, J. E., Sipahimalani, P., Tam, A., Thiessen, N., Wong, T., Wye, N., Bowlby, R., Chuah, E., Guin, R., Shen, H., Bootwalla, M. S., Triche, T., Lai, P. H., Van Den Berg, D. J., Weisenberger, D. J., Balu, S., Bodenheimer, T., Hoyle, A. P., Jefferys, S. R., Meng, S., Mose, L. E., Simons, J. V., Soloway, M. G., Wu, J., Parker, J. S., Hayes, D. N., Roach, J., Buda, E., Jones, C. D., Mieczkowski, P. A., Tan, D., Veluvolu, U., Waring, S., Auman, J. T., Perou, C. M., Wilkerson, M. D., Santoso, N., Parfenov, M., Ren, X., Pantazi, A., Hadjipanayis, A., Seidman, J., Kucherlapati, R., Lee, S., Yang, L., Park, P. J., Xu, A. W., Protopopov, A., Zhang, J., Bristow, C., Mahadeshwar, H. S., Seth, S., Song, X., Tang, J., Zeng, D., Chin, L., Guo, C., Casasent, T. D., Liu, W., Ju, Z., Motter, T., Peng, B., Ryan, M., Su, X., Yang, J. Y., Lorenzi, P. L., Yao, H., Zhang, N., Zhang, J., Mills, G. B., Cho, J., DiCara, D., Frazer, S., Gehlenborg, N., Heiman, D. I., Lin, P., Liu, Y., Stojanov, P., Voet, D., Zhang, H., Zou, L., Bernard, B., Kreisberg, D., Reynolds, S., Rovira, H., Shmulevich, I., Gao, J., Jacobsen, A., Aksoy, B. A., Antipin, Y., Ciriello, G., Dresdner, G., Gross, B., Lee, W., Reva, B., Shen, R., Sinha, R., Sumer, S. O., Weinhold, N., Ladanyi, M., Sander, C., Benz, C., Carlin, D., Haussler, D., Ng, S., Paull, E., Stuart, J., Zhu, J., Liu, Y., Zhang, W., Taylor, B. S., Lichtenberg, T. M., Zmuda, E., Barr, T., Black, A. D., George, M., Hanf, B., Helsel, C., McAllister, C., Ramirez, N. C., Tabler, T. R., Weaver, S., Wise, L., Bowen, J., Gastier-Foster, J. M., Jian, W., Tello, S., Ittman, M., Castro, P., McClenden, W. D., Gibbs, R., Saller, C., Tarvin, K., DiPiero, J. M., Owens, J., Bollag, R., Li, Q., Weinberger, P., Czerwinski, C., Huelsenbeck-Dill, L., Iacocca, M., Petrelli, N., Rabeno, B., Swanson, P., Shelton, T., Curley, E., Gardner, J., Mallery, D., Penny, R., Van Bang, N., Hanh, P. T., Kohl, B., Van Le, X., Phu, B. D., Thorp, R., Tien, N. V., Vinh, L. Q., Sandusky, G., Burks, E., Christ, K., Gee, J., Holway, A., Moinzadeh, A., Sorcini, A., Sullivan, T., Garcia-Grossman, I. R., Regazzi, A. M., Boice, L., Rathmell, W. K., Thorne, L., Bastacky, S., Davies, B., Dhir, R., Gingrich, J., Hrebinko, R., Maranchie, J., Nelson, J., Parwani, A., Bshara, W., Gaudioso, C., Morrison, C., Alexopoulou, V., Bartlett, J., Engel, J., Kodeeswaran, S., Antic, T., O'Donnell, P. H., Smith, N. D., Steinberg, G. D., Egea, S., Gomez-Fernandez, C., Herbert, L., Jorda, M., Soloway, M., Beaver, A., Carter, S., Kapur, P., Lewis, C., Lotan, Y., Bondaruk, J., Czerniak, B., Skinner, E., Aldape, K., Jensen, M. A., Kahn, A. B., Pihl, T. D., Pot, D. A., Srinivasan, D., Wan, Y., Ferguson, M. L., Zenklusen, J. C., Davidsen, T., Demchok, J. A., Shaw, K. R. M., Sheth, M., Tarnuzzer, R., Wang, Z., Yang, L., Hutter, C., Ozenberger, B. A., Sofia, H. J. & Eley, G., 2014, In: Nature. 507, 7492, p. 315-322 8 p.

      Research output: Contribution to journalArticlepeer-review

      2309 Scopus citations
    • Data integration and bioinformatics in the analysis of developing tissues

      Bristow, C. A., Yakoby, N., Kalifa, R., Schupbach, G. & Shvartsman, S., 2005, p. 9302. 1 p.

      Research output: Contribution to conferencePaperpeer-review

    • Discovery of IPN60090, a Clinical Stage Selective Glutaminase-1 (GLS-1) Inhibitor with Excellent Pharmacokinetic and Physicochemical Properties

      Soth, M. J., Le, K., Di Francesco, M. E., Hamilton, M. M., Liu, G., Burke, J. P., Carroll, C. L., Kovacs, J. J., Bardenhagen, J. P., Bristow, C. A., Cardozo, M., Czako, B., De Stanchina, E., Feng, N., Garvey, J. R., Gay, J. P., Do, M. K. G., Greer, J., Han, M., Harris, A., & 27 othersHerrera, Z., Huang, S., Giuliani, V., Jiang, Y., Johnson, S. B., Johnson, T. A., Kang, Z., Leonard, P. G., Liu, Z., McAfoos, T., Miller, M., Morlacchi, P., Mullinax, R. A., Palmer, W. S., Pang, J., Rogers, N., Rudin, C. M., Shepard, H. E., Spencer, N. D., Theroff, J., Wu, Q., Xu, A., Yau, J. A., Draetta, G., Toniatti, C., Heffernan, T. P. & Jones, P., Nov 12 2020, In: Journal of Medicinal Chemistry. 63, 21, p. 12957-12977 21 p.

      Research output: Contribution to journalArticlepeer-review

      48 Scopus citations
    • Dynamic rewiring of biological activity across genotype and lineage revealed by context-dependent functional interactions

      Kim, E., Novak, L. C., Lin, C., Colic, M., Bertolet, L. L., Gheorghe, V., Bristow, C. A. & Hart, T., Dec 2022, In: Genome biology. 23, 1, 140.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      6 Scopus citations
    • Easy NanoString nCounter data analysis with the NanoTube

      Class, C. A., Lukan, C. J., Bristow, C. A. & Do, K. A., Jan 1 2023, In: Bioinformatics. 39, 1, btac762.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      2 Scopus citations
    • Electrochemical sensing of thiocyanate using gold electrodes modified with an underpotentially deposited silver monolayer

      Bristow, C. A., Michalitsch, R. & Laibinis, P. E., Jan 2010, In: Electroanalysis. 22, 2, p. 143-146 4 p.

      Research output: Contribution to journalArticlepeer-review

      4 Scopus citations
    • Erratum: Integrative Analysis Identifies Four Molecular and Clinical Subsets in Uveal Melanoma (Cancer Cell (2017) 32(2) (204–220.e15)(S1535610817302957)(10.1016/j.ccell.2017.07.003))

      TCGA Research Network, Jan 8 2018, In: Cancer cell. 33, 1, p. 151 1 p.

      Research output: Contribution to journalComment/debatepeer-review

      Open Access
      55 Scopus citations
    • Functional Genomics Reveals Synthetic Lethality between Phosphogluconate Dehydrogenase and Oxidative Phosphorylation

      Sun, Y., Bandi, M., Lofton, T., Smith, M., Bristow, C. A., Carugo, A., Rogers, N., Leonard, P., Chang, Q., Mullinax, R., Han, J., Shi, X., Seth, S., Meyers, B. A., Miller, M., Miao, L., Ma, X., Feng, N., Giuliani, V., Geck Do, M., & 18 othersCzako, B., Palmer, W. S., Mseeh, F., Asara, J. M., Jiang, Y., Morlacchi, P., Zhao, S., Peoples, M., Tieu, T. N., Warmoes, M. O., Lorenzi, P. L., Muller, F., DePinho, R. A., Draetta, G. F., Toniatti, C., Jones, P., Heffernan, T. P. & Marszalek, J. R., Jan 8 2019, In: Cell Reports. 26, 2, p. 469-482.e5

      Research output: Contribution to journalArticlepeer-review

      Open Access
      38 Scopus citations
    • Genomic Classification of Cutaneous Melanoma

      The Cancer Genome Atlas Network, Jun 20 2015, In: Cell. 161, 7, p. 1681-1696 16 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      2235 Scopus citations
    • Global impact of somatic structural variation on the DNA methylome of human cancers

      Zhang, Y., Yang, L., Kucherlapati, M., Hadjipanayis, A., Pantazi, A., Bristow, C. A., Lee, E. A., Mahadeshwar, H. S., Tang, J., Zhang, J., Seth, S., Lee, S., Ren, X., Song, X., Sun, H., Seidman, J., Luquette, L. J., Xi, R., Chin, L., Protopopov, A., & 3 othersPark, P. J., Kucherlapati, R. & Creighton, C. J., Oct 15 2019, In: Genome biology. 20, 1, 209.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      23 Scopus citations
    • High-resolution clonal mapping of multi-organ metastasis in triple negative breast cancer

      Echeverria, G. V., Powell, E., Seth, S., Ge, Z., Carugo, A., Bristow, C., Peoples, M., Robinson, F., Qiu, H., Shao, J., Jeter-Jones, S. L., Zhang, X., Ramamoorthy, V., Cai, S., Wu, W., Draetta, G., Moulder, S. L., Symmans, W. F., Chang, J. T., Heffernan, T. P., & 1 othersPiwnica-Worms, H., Dec 1 2018, In: Nature communications. 9, 1, 5079.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      82 Scopus citations
    • Identification of functional elements and regulatory circuits by Drosophila modENCODE

      Roy, S., Ernst, J., Kharchenko, P. V., Kheradpour, P., Negre, N., Eaton, M. L., Landolin, J. M., Bristow, C. A., Ma, L., Lin, M. F., Washietl, S., Arshinoff, B. I., Ay, F., Meyer, P. E., Robine, N., Washington, N. L., Di Stefano, L., Berezikov, E., Brown, C. D., Candeias, R., & 166 othersCarlson, J. W., Carr, A., Jungreis, I., Marbach, D., Sealfon, R., Tolstorukov, M. Y., Will, S., Alekseyenko, A. A., Artieri, C., Booth, B. W., Brooks, A. N., Dai, Q., Davis, C. A., Duff, M. O., Feng, X., Gorchakov, A. A., Gu, T., Henikoff, J. G., Kapranov, P., Li, R., MacAlpine, H. K., Malone, J., Minoda, A., Nordman, J., Okamura, K., Perry, M., Powell, S. K., Riddle, N. C., Sakai, A., Samsonova, A., Sandler, J. E., Schwartz, Y. B., Sher, N., Spokony, R., Sturgill, D., van Baren, M., Wan, K. H., Yang, L., Yu, C., Feingold, E., Good, P., Guyer, M., Lowdon, R., Ahmad, K., Andrews, J., Berger, B., Brenner, S. E., Brent, M. R., Cherbas, L., Elgin, S. C. R., Gingeras, T. R., Grossman, R., Hoskins, R. A., Kaufman, T. C., Kent, W., Kuroda, M. I., Orr-Weaver, T., Perrimon, N., Pirrotta, V., Posakony, J. W., Ren, B., Russell, S., Cherbas, P., Graveley, B. R., Lewis, S., Micklem, G., Oliver, B., Park, P. J., Celniker, S. E., Henikoff, S., Karpen, G. H., Lai, E. C., MacAlpine, D. M., Stein, L. D., White, K. P., Kellis, M., Booth, B., Comstock, C. L. G., Dobin, A., Drenkow, J., Dudoit, S., Dumais, J., Fagegaltier, D., Ghosh, S., Hansen, K. D., Jha, S., Langton, L., Lin, W., Miller, D., Tenney, A. E., Wang, H., Willingham, A. T., Zaleski, C., Zhang, D., Acevedo, D., Bishop, E. P., Gadel, S. E., Jung, Y. L., Kennedy, C. D., Lee, O. K., Linder-Basso, D., Marchetti, S. E., Shanower, G., Nègre, N., Grossman, R. L., Auburn, R., Bellen, H. J., Chen, J., Domanus, M. H., Hanley, D., Heinz, E., Li, Z., Meyer, F., Miller, S. W., Morrison, C. A., Scheftner, D. A., Senderowicz, L., Shah, P. K., Suchy, S., Tian, F., Venken, K. J. T., White, R., Wilkening, J., Zieba, J., Nordman, J. T., Orr-Weaver, T. L., DeNapoli, L. C., Ding, Q., Eng, T., Kashevsky, H., Li, S., Prinz, J. A., Hannon, G. J., Hirst, M., Marra, M., Rooks, M., Zhao, Y., Bryson, T. D., Perry, M. D., Kent, W. J., Lewis, S. E., Barber, G., Chateigner, A., Clawson, H., Contrino, S., Guillier, F., Hinrichs, A. S., Kephart, E. T., Lloyd, P., Lyne, R., McKay, S., Moore, R. A., Mungall, C., Rutherford, K. M., Ruzanov, P., Smith, R., Stinson, E. O., Zha, Z., Artieri, C. G., Malone, J. H., Jiang, L., Mattiuzzo, N., Feingold, E. A., Good, P. J., Guyer, M. S. & Lowdon, R. F., Dec 24 2010, In: Science. 330, 6012, p. 1787-1797 11 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      956 Scopus citations
    • Increased Tumor Glycolysis Characterizes Immune Resistance to Adoptive T Cell Therapy

      Cascone, T., McKenzie, J. A., Mbofung, R. M., Punt, S., Wang, Z., Xu, C., Williams, L. J., Wang, Z., Bristow, C. A., Carugo, A., Peoples, M. D., Li, L., Karpinets, T., Huang, L., Malu, S., Creasy, C., Leahey, S. E., Chen, J., Chen, Y., Pelicano, H., & 17 othersBernatchez, C., Gopal, Y. N. V., Heffernan, T. P., Hu, J., Wang, J., Amaria, R. N., Garraway, L. A., Huang, P., Yang, P., Wistuba, I. I., Woodman, S. E., Roszik, J., Davis, R. E., Davies, M. A., Heymach, J. V., Hwu, P. & Peng, W., May 1 2018, In: Cell Metabolism. 27, 5, p. 977-987.e4

      Research output: Contribution to journalArticlepeer-review

      Open Access
      381 Scopus citations
    • Integrated genomic and molecular characterization of cervical cancer

      The Cancer Genome Atlas Research Network, Mar 16 2017, In: Nature. 543, 7645, p. 378-384 7 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      985 Scopus citations
    • Integrated Genomic Characterization of Papillary Thyroid Carcinoma

      Agrawal, N., Akbani, R., Aksoy, B. A., Ally, A., Arachchi, H., Asa, S. L., Auman, J. T., Balasundaram, M., Balu, S., Baylin, S. B., Behera, M., Bernard, B., Beroukhim, R., Bishop, J. A., Black, A. D., Bodenheimer, T., Boice, L., Bootwalla, M. S., Bowen, J., Bowlby, R., & 223 othersBristow, C. A., Brookens, R., Brooks, D., Bryant, R., Buda, E., Butterfield, Y. S. N., Carling, T., Carlsen, R., Carter, S. L., Carty, S. E., Chan, T. A., Chen, A. Y., Cherniack, A. D., Cheung, D., Chin, L., Cho, J., Chu, A., Chuah, E., Cibulskis, K., Ciriello, G., Clarke, A., Clayman, G. L., Cope, L., Copland, J. A., Covington, K., Danilova, L., Davidsen, T., Demchok, J. A., DiCara, D., Dhalla, N., Dhir, R., Dookran, S. S., Dresdner, G., Eldridge, J., Eley, G., El-Naggar, A. K., Eng, S., Fagin, J. A., Fennell, T., Ferris, R. L., Fisher, S., Frazer, S., Frick, J., Gabriel, S. B., Ganly, I., Gao, J., Garraway, L. A., Gastier-Foster, J. M., Getz, G., Gehlenborg, N., Ghossein, R., Gibbs, R. A., Giordano, T. J., Gomez-Hernandez, K., Grimsby, J., Gross, B., Guin, R., Hadjipanayis, A., Harper, H. A., Hayes, D. N., Heiman, D. I., Herman, J. G., Hoadley, K. A., Hofree, M., Holt, R. A., Hoyle, A. P., Huang, F. W., Huang, M., Hutter, C. M., Ideker, T., Iype, L., Jacobsen, A., Jefferys, S. R., Jones, C. D., Jones, S. J. M., Kasaian, K., Kebebew, E., Khuri, F. R., Kim, J., Kramer, R., Kreisberg, R., Kucherlapati, R., Kwiatkowski, D. J., Ladanyi, M., Lai, P. H., Laird, P. W., Lander, E., Lawrence, M. S., Lee, D., Lee, E., Lee, S., Lee, W., Leraas, K. M., Lichtenberg, T. M., Lichtenstein, L., Lin, P., Ling, S., Liu, J., Liu, W., Liu, Y., LiVolsi, V. A., Lu, Y., Ma, Y., Mahadeshwar, H. S., Marra, M. A., Mayo, M., McFadden, D. G., Meng, S., Meyerson, M., Mieczkowski, P. A., Miller, M., Mills, G., Moore, R. A., Mose, L. E., Mungall, A. J., Murray, B. A., Nikiforov, Y. E., Noble, M. S., Ojesina, A. I., Owonikoko, T. K., Ozenberger, B. A., Pantazi, A., Parfenov, M., Park, P. J., Parker, J. S., Paull, E. O., Pedamallu, C. S., Perou, C. M., Prins, J. F., Protopopov, A., Ramalingam, S. S., Ramirez, N. C., Ramirez, R., Raphael, B. J., Rathmell, W. K., Ren, X., Reynolds, S. M., Rheinbay, E., Ringel, M. D., Rivera, M., Roach, J., Robertson, A. G., Rosenberg, M. W., Rosenthal, M., Sadeghi, S., Saksena, G., Sander, C., Santoso, N., Schein, J. E., Schultz, N., Schumacher, S. E., Seethala, R. R., Seidman, J., Senbabaoglu, Y., Seth, S., Sharpe, S., Shaw, K. R. M., Shen, J. P., Shen, R., Sherman, S., Sheth, M., Shi, Y., Shmulevich, I., Sica, G. L., Simons, J. V., Sinha, R., Sipahimalani, P., Smallridge, R. C., Sofia, H. J., Soloway, M. G., Song, X., Sougnez, C., Stewart, C., Stojanov, P., Stuart, J. M., Sumer, S. O., Sun, Y., Tabak, B., Tam, A., Tan, D., Tang, J., Tarnuzzer, R., Taylor, B. S., Thiessen, N., Thorne, L., Thorsson, V., Tuttle, R. M., Umbricht, C. B., Van Den Berg, D. J., Vandin, F., Veluvolu, U., Verhaak, R. G. W., Vinco, M., Voet, D., Walter, V., Wang, Z., Waring, S., Weinberger, P. M., Weinhold, N., Weinstein, J. N., Weisenberger, D. J., Wheeler, D., Wilkerson, M. D., Wilson, J., Williams, M., Winer, D. A., Wise, L., Wu, J., Xi, L., Xu, A. W., Yang, L., Yang, L., Zack, T. I., Zeiger, M. A., Zeng, D., Zenklusen, J. C., Zhao, N., Zhang, H., Zhang, J., Zhang, J., Zhang, W., Zmuda, E. & Zou, L., Oct 23 2014, In: Cell. 159, 3, p. 676-690 15 p.

      Research output: Contribution to journalArticlepeer-review

      2157 Scopus citations
    • Integrative Analysis Identifies Four Molecular and Clinical Subsets in Uveal Melanoma

      Robertson, A. G., Shih, J., Yau, C., Gibb, E. A., Oba, J., Mungall, K. L., Hess, J. M., Uzunangelov, V., Walter, V., Danilova, L., Lichtenberg, T. M., Kucherlapati, M., Kimes, P. K., Tang, M., Penson, A., Babur, O., Akbani, R., Bristow, C. A., Hoadley, K. A., Iype, L., & 150 othersChang, M. T., Abdel-Rahman, M. H., Ally, A., Auman, J. T., Balasundaram, M., Balu, S., Benz, C., Beroukhim, R., Birol, I., Bodenheimer, T., Bowen, J., Bowlby, R., Brooks, D., Carlsen, R., Cebulla, C. M., Cherniack, A. D., Chin, L., Cho, J., Chuah, E., Chudamani, S., Cibulskis, C., Cibulskis, K., Cope, L., Coupland, S. E., Defreitas, T., Demchok, J. A., Desjardins, L., Dhalla, N., Esmaeli, B., Felau, I., Ferguson, M. L., Frazer, S., Gabriel, S. B., Gastier-Foster, J. M., Gehlenborg, N., Gerken, M., Gershenwald, J. E., Getz, G., Griewank, K. G., Grimm, E. A., Hayes, D. N., Hegde, A. M., Heiman, D. I., Helsel, C., Hobensack, S., Holt, R. A., Hoyle, A. P., Hu, X., Hutter, C. M., Jager, M. J., Jefferys, S. R., Jones, C. D., Jones, S. J. M., Kandoth, C., Kasaian, K., Kim, J., Kucherlapati, R., Lander, E., Lawrence, M. S., Lazar, A. J., Lee, S., Leraas, K. M., Lin, P., Liu, J., Liu, W., Lolla, L., Lu, Y., Ma, Y., Mahadeshwar, H. S., Mariani, O., Marra, M. A., Mayo, M., Meier, S., Meng, S., Meyerson, M., Mieczkowski, P. A., Mills, G. B., Moore, R. A., Mose, L. E., Mungall, A. J., Murray, B. A., Naresh, R., Noble, M. S., Pantazi, A., Parfenov, M., Park, P. J., Parker, J. S., Perou, C. M., Pihl, T., Pilarski, R., Protopopov, A., Radenbaugh, A., Rai, K., Ramirez, N. C., Ren, X., Reynolds, S. M., Roach, J., Roman-Roman, S., Roszik, J., Sadeghi, S., Saksena, G., Sastre, X., Schadendorf, D., Schein, J. E., Schoenfield, L., Schumacher, S. E., Seidman, J., Seth, S., Sethi, G., Sheth, M., Shi, Y., Shields, C., Shmulevich, I., Simons, J. V., Singh, A. D., Sipahimalani, P., Skelly, T., Sofia, H., Soloway, M. G., Song, X., Stern, M. H., Stuart, J., Sun, Q., Sun, H., Tam, A., Tan, D., Tang, J., Tarnuzzer, R., Taylor, B. S., Thiessen, N., Thorsson, V., Tse, K., Veluvolu, U., Verhaak, R., Voet, D., Wan, Y., Wang, Z., Weinstein, J. N., Wilkerson, M. D., Williams, M. D., Wise, L., Woodman, S. E., Wong, T., Wu, Y., Yang, L., Yang, L., Zenklusen, J. C., Zhang, J., Zhang, H. & Zmuda, E., Aug 14 2017, In: Cancer cell. 32, 2, p. 204-220.e15

      Research output: Contribution to journalArticlepeer-review

      Open Access
      563 Scopus citations
    • Interferon signaling promotes tolerance to chromosomal instability during metastatic evolution in renal cancer

      Perelli, L., Carbone, F., Zhang, L., Huang, J. K., Le, C., Khan, H., Citron, F., Del Poggetto, E., Gutschner, T., Tomihara, H., Soeung, M., Minelli, R., Srinivasan, S., Peoples, M., Lam, T. N. A., Lundgren, S., Xia, R., Zhu, C., Mohamed, A. M. T., Zhang, J., & 24 othersSircar, K., Sgambato, A., Gao, J. J., Jonasch, E., Draetta, G. F., Futreal, A., Bakouny, Z., Van Allen, E. M., Choueiri, T., Signoretti, S., Msaouel, P., Litchfield, K., Turajlic, S., Wang, L., Chen, Y. B., Di Natale, R. G., Hakimi, A. A., Giuliani, V., Heffernan, T. P., Viale, A., Bristow, C. A., Tannir, N. M., Carugo, A. & Genovese, G., Jul 2023, In: Nature Cancer. 4, 7, p. 984-1000 17 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      4 Scopus citations
    • In Vivo Functional Platform Targeting Patient-Derived Xenografts Identifies WDR5-Myc Association as a Critical Determinant of Pancreatic Cancer

      Carugo, A., Genovese, G., Seth, S., Nezi, L., Rose, J. L., Bossi, D., Cicalese, A., Shah, P. K., Viale, A., Pettazzoni, P. F., Akdemir, K. C., Bristow, C. A., Robinson, F. S., Tepper, J., Sanchez, N., Gupta, S., Estecio, M. R., Giuliani, V., Dellino, G. I., Riva, L., & 16 othersYao, W., Di Francesco, M. E., Green, T., D'Alesio, C., Corti, D., Kang, Y., Jones, P., Wang, H., Fleming, J. B., Maitra, A., Pelicci, P. G., Chin, L., DePinho, R. A., Lanfrancone, L., Heffernan, T. P. & Draetta, G. F., Jun 1 2016, In: Cell Reports. 16, 1, p. 133-147 15 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      94 Scopus citations
    • Loss of ARID1A Promotes Epithelial–Mesenchymal Transition and Sensitizes Pancreatic Tumors to Proteotoxic Stress A C

      Tomihara, H., Carbone, F., Perelli, L., Huang, J. K., Soeung, M., Rose, J. L., Robinson, F. S., Deribe, Y. L., Feng, N., Takeda, M., Inoue, A., Poggetto, E. D., Deem, A. K., Maitra, A., Msaouel, P., Tannir, N. M., Draetta, G. F., Viale, A., Heffernan, T. P., Bristow, C. A., & 2 othersCarugo, A. & Genovese, G., Jan 15 2021, In: Cancer Research. 81, 2, p. 332-343 12 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      23 Scopus citations
    • Modeling of patient-derived xenografts in colorectal cancer

      Katsiampoura, A., Raghav, K., Jiang, Z. Q., Menter, D. G., Varkaris, A., Morelli, M. P., Manuel, S., Wu, J., Sorokin, A. V., Rizi, B. S., Bristow, C., Tian, F., Airhart, S., Cheng, M., Broom, B. M., Morris, J., Overman, M. J., Powis, G. & Kopetz, S., Jul 2017, In: Molecular cancer therapeutics. 16, 7, p. 1435-1442 8 p.

      Research output: Contribution to journalArticlepeer-review

      41 Scopus citations
    • Molecular landscape of ErbB2/ErbB3 mutated colorectal cancer

      Loree, J. M., Bailey, A. M., Johnson, A. M., Yu, Y., Wu, W., Bristow, C. A., Davis, J. S., Shaw, K. R., Broaddus, R., Banks, K. C., Lanman, R. B., Meric-Bernstam, F., Overman, M. J., Kopetz, S. & Raghav, K., Dec 1 2018, In: Journal of the National Cancer Institute. 110, 12, p. 1409-1417 9 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      47 Scopus citations
    • Molecular Profiling Reveals Biologically Discrete Subsets and Pathways of Progression in Diffuse Glioma

      Ceccarelli, M., Barthel, F. P., Malta, T. M., Sabedot, T. S., Salama, S. R., Murray, B. A., Morozova, O., Newton, Y., Radenbaugh, A., Pagnotta, S. M., Anjum, S., Wang, J., Manyam, G., Zoppoli, P., Ling, S., Rao, A. A., Grifford, M., Cherniack, A. D., Zhang, H., Poisson, L., & 188 othersCarlotti, C. G., Tirapelli, D. P. D. C., Uppore Kukkillaya, A. R., Mikkelsen, T., Lau, C. C., Yung, W. K. A., Rabadan, R., Huse, J., Brat, D. J., Lehman, N. L., Barnholtz-Sloan, J. S., Zheng, S., Hess, K. R., Rao, G., Meyerson, M., Beroukhim, R., Cooper, L., Akbani, R., Wrensch, M., Haussler, D., Aldape, K. D., Laird, P. W., Gutmann, D. H., Noushmehr, H., Arachchi, H., Auman, J. T., Balasundaram, M., Balu, S., Barnett, G., Baylin, S., Bell, S., Benz, C., Bir, N., Black, K. L., Bodenheimer, T., Boice, L., Bootwalla, M. S., Bowen, J., Bristow, C. A., Butterfield, Y. S. N., Chen, Q. R., Chin, L., Cho, J., Chuah, E., Chudamani, S., Coetzee, S. G., Cohen, M. L., Colman, H., Couce, M., D'Angelo, F., Davidsen, T., Davis, A., Demchok, J. A., Devine, K., Ding, L., Duell, R., Elder, J. B., Eschbacher, J. M., Fehrenbach, A., Ferguson, M., Frazer, S., Fuller, G., Fulop, J., Gabriel, S. B., Garofano, L., Gastier-Foster, J. M., Gehlenborg, N., Gerken, M., Getz, G., Giannini, C., Gibson, W. J., Hadjipanayis, A., Hayes, D. N., Heiman, D. I., Hermes, B., Hilty, J., Hoadley, K. A., Hoyle, A. P., Huang, M., Jefferys, S. R., Jones, C. D., Jones, S. J. M., Ju, Z., Kastl, A., Kendler, A., Kim, J., Kucherlapati, R., Lai, P. H., Lawrence, M. S., Lee, S., Leraas, K. M., Lichtenberg, T. M., Lin, P., Liu, Y., Liu, J., Ljubimova, J. Y., Lu, Y., Ma, Y., Maglinte, D. T., Mahadeshwar, H. S., Marra, M. A., McGraw, M., McPherson, C., Meng, S., Mieczkowski, P. A., Miller, C. R., Mills, G. B., Moore, R. A., Mose, L. E., Mungall, A. J., Naresh, R., Naska, T., Neder, L., Noble, M. S., Noss, A., O'Neill, B. P., Ostrom, Q. T., Palmer, C., Pantazi, A., Parfenov, M., Park, P. J., Parker, J. S., Perou, C. M., Pierson, C. R., Pihl, T., Protopopov, A., Radenbaugh, A., Ramirez, N. C., Rathmell, W. K., Ren, X., Roach, J., Robertson, A. G., Saksena, G., Schein, J. E., Schumacher, S. E., Seidman, J., Senecal, K., Seth, S., Shen, H., Shi, Y., Shih, J., Shimmel, K., Sicotte, H., Sifri, S., Silva, T., Simons, J. V., Singh, R., Skelly, T., Sloan, A. E., Sofia, H. J., Soloway, M. G., Song, X., Sougnez, C., Souza, C., Staugaitis, S. M., Sun, H., Sun, C., Tan, D., Tang, J., Tang, Y., Thorne, L., Trevisan, F. A., Triche, T., Van Den Berg, D. J., Veluvolu, U., Voet, D., Wan, Y., Wang, Z., Warnick, R., Weinstein, J. N., Weisenberger, D. J., Wilkerson, M. D., Williams, F., Wise, L., Wolinsky, Y., Wu, J., Xu, A. W., Yang, L., Yang, L., Zack, T. I., Zenklusen, J. C., Zhang, J., Zhang, W., Zhang, J., Zmuda, E., Noushmehr, H., Iavarone, A. & Verhaak, R., Jan 28 2016, In: Cell. 164, 3, p. 550-563 14 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      1446 Scopus citations
    • Multiplatform analysis of 12 cancer types reveals molecular classification within and across tissues of origin

      The Cancer Genome Atlas Research Network, Aug 14 2014, In: Cell. 158, 4, p. 929-944 16 p.

      Research output: Contribution to journalArticlepeer-review

      1093 Scopus citations
    • Ntrk1 promotes resistance to PD-1 checkpoint blockade in Mesenchymal Kras/p53 mutant lung cancer

      Konen, J. M., Rodriguez, B. L., Fradette, J. J., Gibson, L., Davis, D., Minelli, R., Peoples, M. D., Kovacs, J., Carugo, A., Bristow, C., Heffernan, T. & Gibbons, D. L., Apr 2019, In: Cancers. 11, 4, 462.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      19 Scopus citations
    • Oncogenic KRAS recruits an expansive transcriptional network through mutant p53 to drive pancreatic cancer metastasis

      Kim, M. P., Li, X., Deng, J., Zhang, Y., Dai, B., Allton, K. L., Hughes, T. G., Siangco, C., Augustine, J. J., Kang, YA., McDaniel, J. M., Xiong, S., Koay, E. J., McAllister, F., Bristow, C. A., Heffernan, T. P., Maitra, A., Liu, B., Barton, M. C., Wasylishen, A. R., & 2 othersFleming, J. B. & Lozano, G., Aug 2021, In: Cancer discovery. 11, 8, p. 2094-2111 18 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      64 Scopus citations
    • Oxidative phosphorylation is a metabolic vulnerability in chemotherapy-resistant triple-negative breast cancer

      Evans, K. W., Yuca, E., Scott, S. S., Zhao, M., Arango, N. P., Cruz Pico, C. X., Saridogan, T., Shariati, M., Class, C. A., Bristow, C. A., Vellano, C. P., Zheng, X., Gonzalez-Angulo, A. M., Su, X., Tapia, C., Chen, K., Akcakanat, A., Lim, B., Tripathy, D., Yap, T. A., & 6 othersDi Francesco, M. E., Draetta, G. F., Jones, P., Heffernan, T. P., Marszalek, J. R. & Meric-Bernstam, F., Nov 1 2021, In: Cancer Research. 81, 21, p. 5572-5581 10 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      69 Scopus citations
    • PAF promotes stemness and radioresistance of glioma stem cells

      Ong, D. S. T., Hu, B., Ho, Y. W., Sauvé, C. E. G., Bristow, C. A., Wang, Q., Multani, A. S., Chen, P., Nezi, L., Jiang, S., Gorman, C. E., Monasterio, M. M., Koul, D., Marchesini, M., Colla, S., Jin, E. J., Sulman, E. P., Spring, D. J., Yung, W. K. A., Verhaak, R. G. W., & 3 othersChin, L., Wang, Y. A. & DePinho, R. A., Oct 24 2017, In: Proceedings of the National Academy of Sciences of the United States of America. 114, 43, p. E9085-E9095

      Research output: Contribution to journalArticlepeer-review

      Open Access
      38 Scopus citations
    • PICKLES v3: the updated database of pooled in vitro CRISPR knockout library essentiality screens

      Novak, L. C., Chou, J., Colic, M., Bristow, C. A. & Hart, T., Jan 6 2023, In: Nucleic acids research. 51, 1, p. D1117-D1121

      Research output: Contribution to journalArticlepeer-review

      Open Access
      1 Scopus citations
    • Pooled library screening with multiplexed Cpf1 library

      Liu, J., Srinivasan, S., Li, C. Y., Ho, I. L., Rose, J., Shaheen, M. A., Wang, G., Yao, W., Deem, A., Bristow, C., Hart, T. & Draetta, G., Dec 1 2019, In: Nature communications. 10, 1, 3144.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      31 Scopus citations
    • PPM1D Mutations Drive Clonal Hematopoiesis in Response to Cytotoxic Chemotherapy

      Hsu, J. I., Dayaram, T., Tovy, A., De Braekeleer, E., Jeong, M., Wang, F., Zhang, J., Heffernan, T. P., Gera, S., Kovacs, J. J., Marszalek, J. R., Bristow, C., Yan, Y., Garcia-Manero, G., Kantarjian, H., Vassiliou, G., Futreal, P. A., Donehower, L. A., Takahashi, K. & Goodell, M. A., Nov 1 2018, In: Cell Stem Cell. 23, 5, p. 700-713.e6

      Research output: Contribution to journalArticlepeer-review

      Open Access
      250 Scopus citations
    • Predictive regulatory models in Drosophila melanogaster by integrative inference of transcriptional networks

      Marbach, D., Roy, S., Ay, F., Meyer, P. E., Candeias, R., Kahveci, T., Bristow, C. A. & Kellis, M., Jul 2012, In: Genome research. 22, 7, p. 1334-1349 16 p.

      Research output: Contribution to journalArticlepeer-review

      Open Access
      90 Scopus citations
    • Predictive signatures inform the effective repurposing of decitabine to treat KRAS-dependent pancreatic ductal adenocarcinoma

      Mottini, C., Tomihara, H., Carrella, D., Lamolinara, A., Iezzi, M., Huang, J. K., Amoreo, C. A., Buglioni, S., Manni, I., Robinson, F. S., Minelli, R., Kang, Y., Fleming, J. B., Kim, M. P., Bristow, C. A., Trisciuoglio, D., Iuliano, A., Bufalo, D. D., Bernardo, D. D., Melisi, D., & 4 othersDraetta, G. F., Ciliberto, G., Carugo, A. & Cardone, L., Nov 1 2019, In: Cancer Research. 79, 21, p. 5612-5625 14 p.

      Research output: Contribution to journalArticlepeer-review

      11 Scopus citations