The University of Texas MD Anderson Cancer Center

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Research Output 1906 2019

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2019

AFM to study pore-forming proteins

Unsay, J. D. & Garcia-Saez, A., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 191-202 12 p. (Methods in Molecular Biology; vol. 1886).

Research output: Chapter in Book/Report/Conference proceedingChapter

Porins
Atomic Force Microscopy
Membranes
Lipid Bilayers
Microscopy

Detection and quantitation of acetylated histones on replicating DNA using in situ proximity ligation assay and click-it chemistry

Lazarchuk, P., Roy, S., Schlacher, K. & Sidorova, J., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 29-45 17 p. (Methods in Molecular Biology; vol. 1983).

Research output: Chapter in Book/Report/Conference proceedingChapter

Click Chemistry
Histone Deacetylase Inhibitors
Histones
Ligation
DNA

Detection of microRNA-mediated target mRNA cleavage and 3′-uridylation in human cells by a SLA-RT-PCR analysis

Lin, J. & Ji, L., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 125-136 12 p. (Methods in Molecular Biology; vol. 1870).

Research output: Chapter in Book/Report/Conference proceedingChapter

MicroRNAs
Reverse Transcription
Stem Cells
Polymerase Chain Reaction
Messenger RNA

Exosomes from cell culture-conditioned medium: Isolation by ultracentrifugation and characterization

Purushothaman, A., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 233-244 12 p. (Methods in Molecular Biology; vol. 1952).

Research output: Chapter in Book/Report/Conference proceedingChapter

Exosomes
Ultracentrifugation
Conditioned Culture Medium
Culture Media
Cell Culture Techniques

Experimental approaches to investigate the role of helicase acetylation in regulating r-loop stability

Song, C. & Grummt, I., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 237-253 17 p. (Methods in Molecular Biology; vol. 1983).

Research output: Chapter in Book/Report/Conference proceedingChapter

Nucleic Acid Heteroduplexes
RNA Helicases
Genomic Instability
Single-Stranded DNA
Acetylation

Extracellular Flux Assays to Determine Oxidative Phosphorylation and Glycolysis in Chronic Lymphocytic Leukemia Cells

Vangapandu, H. V. & Gandhi, V. V., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 121-128 8 p. (Methods in Molecular Biology; vol. 1881).

Research output: Chapter in Book/Report/Conference proceedingChapter

Oxidative Phosphorylation
Glycolysis
B-Cell Chronic Lymphocytic Leukemia
Suspensions
Smegmamorpha

Ex Vivo Pharmacological Profiling in Chronic Lymphocytic Leukemia Cells

Aslan, B., Ayres, M. L. & Gandhi, V. V., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 19-25 7 p. (Methods in Molecular Biology; vol. 1881).

Research output: Chapter in Book/Report/Conference proceedingChapter

B-Cell Chronic Lymphocytic Leukemia
Pharmacology
Pharmaceutical Preparations
Drug Combinations
Lymphocytes

Generation of whole genome bisulfite sequencing libraries from very low DNA input

Weichenhan, D., Imbusch, C. D., Wang, Q., Brors, B. & Plass, C., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 229-248 20 p. (Methods in Molecular Biology; vol. 1956).

Research output: Chapter in Book/Report/Conference proceedingChapter

DNA Methylation
Genome
DNA
Oligonucleotides
Transposases

Glycosylation and Antitumor Immunity

Cadena, A. P., Cushman, T. R. & Welsh, J., Jan 1 2019, International Review of Cell and Molecular Biology. Galluzzi, L. (ed.). Elsevier Inc., p. 111-127 17 p. (International Review of Cell and Molecular Biology; vol. 343).

Research output: Chapter in Book/Report/Conference proceedingChapter

Glycosylation
Immunity
Polysaccharides
Immune system
Immune System

In Vitro Assay to Study CLL and Monocyte Interactions

Bertilaccio, M. T. S., Zhang, R., Banerjee, P. & Gandhi, V. V., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 113-119 7 p. (Methods in Molecular Biology; vol. 1881).

Research output: Chapter in Book/Report/Conference proceedingChapter

Monocytes
Flow Cytometry
Drug Delivery Systems
Drug Interactions
Color

Measurement of bulk autophagy by a cargo sequestration assay

Engedal, N., Luhr, M., Szalai, P. & Seglen, P. O., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 307-313 7 p. (Methods in Molecular Biology; vol. 1880).

Research output: Chapter in Book/Report/Conference proceedingChapter

Autophagy
L-Lactate Dehydrogenase
Cytoplasm
Vacuoles
Lysosomes

Measurement of miRNAs in Chronic Lymphocytic Leukemia Patient Samples by Quantitative Reverse Transcription PCR

Van Roosbroeck, K., Bayraktar, R. & Calin, G. A., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 267-276 10 p. (Methods in Molecular Biology; vol. 1881).

Research output: Chapter in Book/Report/Conference proceedingChapter

B-Cell Chronic Lymphocytic Leukemia
MicroRNAs
Reverse Transcription
Polymerase Chain Reaction
Monocytes

NK-Cell lymphomas

Chihara, D. & Oki, Y., Jan 1 2019, Cancer Treatment and Research. Springer International Publishing, p. 163-184 22 p. (Cancer Treatment and Research; vol. 176).

Research output: Chapter in Book/Report/Conference proceedingChapter

Natural Killer Cells
Lymphoma
Extranodal NK-T-Cell Lymphoma
Asparaginase
Drug Therapy

Osteonectin promoter-mediated suicide gene therapy of prostate cancer

Hsiao, W. C., Sung, S-Y., Chung, L. W. K. & Hsieh, C-L., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 27-42 16 p. (Methods in Molecular Biology; vol. 1895).

Research output: Chapter in Book/Report/Conference proceedingChapter

Osteonectin
Thymidine Kinase
Simplexvirus
Genetic Therapy
Suicide

Pancreatic acinar-to-ductal metaplasia and pancreatic cancer

Wang, L., Xie, D. & Wei, D., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 299-308 10 p. (Methods in Molecular Biology; vol. 1882).

Research output: Chapter in Book/Report/Conference proceedingChapter

Metaplasia
Pancreatic Neoplasms
Acinar Cells
Pancreas
Pressure

Photochemical internalization enhanced nonviral suicide gene therapy

Sun, C. H., Berg, K. & Hirschberg, H., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 165-176 12 p. (Methods in Molecular Biology; vol. 1895).

Research output: Chapter in Book/Report/Conference proceedingChapter

Genetic Therapy
Suicide
Transfection
Fluorouracil
Cytosine Deaminase

Studying autophagic lysosome reformation in cells and by an in vitro reconstitution system

Chen, Y., Su, Q. P. & Yu, L., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 163-172 10 p. (Methods in Molecular Biology; vol. 1880).

Research output: Chapter in Book/Report/Conference proceedingChapter

Lysosomes
Autophagy
In Vitro Techniques
Homeostasis
Membranes

Whole-genome bisulfite sequencing for the methylation analysis of insect genomes

Gatzmann, F. & Lyko, F., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 141-156 16 p. (Methods in Molecular Biology; vol. 1858).

Research output: Chapter in Book/Report/Conference proceedingChapter

Insect Genome
Methylation
Genome
DNA Methylation
hydrogen sulfite
2018

Adrenal tumors

Duncan, C. B. & Lee, J. E., Jan 1 2018, The MD Anderson Surgical Oncology Handbook, Sixth Edition. Wolters Kluwer Health Adis (ESP), p. 429-462 34 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Glandular and Epithelial Neoplasms

Anesthesia for bronchoscopic procedures

Sarkiss, M. G., Jun 26 2018, Anesthesiology: A Practical Approach. Springer International Publishing, p. 199-213 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Anesthesia

Antiviral treatment and prophylaxis in immunocompromised hosts

Ariza Heredia, E., Chaer, F. E. & Chemaly, R. F., Jun 18 2018, Management of Infections in the Immunocompromised Host. Springer International Publishing, p. 317-337 21 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Immunocompromised Host
Antiviral Agents
1 Citation (Scopus)

Apoptosis: Signaling pathways in pancreatic cancer pathogenesis

McConkey, D. J. & Choi, W., Apr 11 2018, Pancreatic Cancer. Springer New York, p. 369-382 14 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Pancreatic Neoplasms
Apoptosis
Neoplasms
Drug Therapy
Pancreatic Diseases

Auditory rehabilitation for temporal bone cancer

Ibrahim, B., Woods, O., Saliba, I. & Nader, M-E., May 3 2018, Temporal Bone Cancer. Springer International Publishing, p. 347-354 8 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Bone Neoplasms
Temporal Bone
Rehabilitation

Auricular prosthetic rehabilitation

Montgomery, P. C., Hofstede, T. M. & Chambers, M. S., May 3 2018, Temporal Bone Cancer. Springer International Publishing, p. 355-362 8 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Rehabilitation

Autotransfusion

Roldan, C. & Mehta, A., 2018, Reichman's Emergency Medicine Procedures. 3 ed. Mcgraw Hill, p. 1828-1832

Research output: Chapter in Book/Report/Conference proceedingChapter

Basics of etiology and pathophysiology of pain in cancer

Koyyalagunta, D., Jan 1 2018, Cancer Pain Management in Developing Countries. Wolters Kluwer Health, p. 15-24 10 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Cancer Pain

Benign fibrous tumors

Satcher, R., Jan 1 2018, Orthopaedic Knowledge Update: Musculoskeletal Tumors 3. Wolters Kluwer Health, p. 275-280 6 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Neoplasms

Benign Neoplasms of the Neck (Soft Tissue, Bone, and Lymph Node)

Bell, D., Feb 1 2018, Head and Neck Pathology: A Volume in the Series: Foundations in Diagnostic Pathology. Elsevier, p. 509-520.e1

Research output: Chapter in Book/Report/Conference proceedingChapter

Neck
Lymph Nodes
Bone and Bones
Neoplasms

Borderline resectable pancreatic cancer

Varadhachary, G. R., Apr 11 2018, Pancreatic Cancer. Springer New York, p. 1001-1020 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Pancreatic Neoplasms
oxaliplatin
irinotecan
gemcitabine
Neoplasms

Cancer of the anal region

Czito, B. G., Ahmed, S., Kalady, M. F. & Eng, C., Nov 16 2018, DeVita, Hellman, and Rosenberg's Cancer: Principles & Practice of Oncology. Wolters Kluwer Health Pharma Solutions (Europe) Ltd, p. 997-1013 17 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Anus Neoplasms

Cancer of the cervix, vagina, and vulva

Eifel, P. J., Klopp, A. H., Berek, J. S. & Konstantinopoulos, P. A., Nov 16 2018, DeVita, Hellman, and Rosenberg's Cancer: Principles & Practice of Oncology. Wolters Kluwer Health Pharma Solutions (Europe) Ltd, p. 1172-1210 39 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Vaginal Neoplasms
Vulvar Neoplasms
Uterine Cervical Neoplasms

Cancer of the colon, rectum, and anus

Clarke, C. N., You, Y-Q. N. & Feig, B. W., Jan 1 2018, The MD Anderson Surgical Oncology Handbook, Sixth Edition. Wolters Kluwer Health Adis (ESP), p. 304-356 53 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Anus Neoplasms
Rectal Neoplasms
Colonic Neoplasms

Cancer of the head and neck

Goepfert, R. P. & Zafereo, M., Jan 1 2018, The MD Anderson Surgical Oncology Handbook, Sixth Edition. Wolters Kluwer Health Adis (ESP), p. 172-199 28 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Head and Neck Neoplasms

Cancer of the testis

Campbell, M., Karam, J. A. & Logothetis, C. J., Nov 16 2018, DeVita, Hellman, and Rosenberg's Cancer: Principles & Practice of Oncology. Wolters Kluwer Health Pharma Solutions (Europe) Ltd, p. 1145-1162 18 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Testicular Neoplasms

Cancer of unknown primary site

Holder, A. M. & Varadhachary, G. R., Jan 1 2018, The MD Anderson Surgical Oncology Handbook, Sixth Edition. Wolters Kluwer Health Adis (ESP), p. 613-626 14 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Neoplasms

Cancer survivorship in adults

Kiserud, C. E., Dahl, A. A. & Fossa, S. D., Jan 1 2018, Recent Results in Cancer Research. Springer New York LLC, p. 123-143 21 p. (Recent Results in Cancer Research; vol. 210).

Research output: Chapter in Book/Report/Conference proceedingChapter

Survival Rate
Survivors
Neoplasms
Western World
Aptitude

Carcinoma of the thyroid gland and neoplasms of the parathyroid glands

Long, K. L. & Grubbs, E. G., Jan 1 2018, The MD Anderson Surgical Oncology Handbook, Sixth Edition. Wolters Kluwer Health Adis (ESP), p. 463-491 29 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Parathyroid Glands
Thyroid Neoplasms
Thyroid Gland
Carcinoma
2 Citations (Scopus)

Cell-mediated cytotoxicity against fresh solid tumor cells: Regulation by soluble mediators

Itoh, K. & Balch, C. M., Jan 1 2018, Interleukin-2 and Killer Cells in Cancer. CRC Press, p. 65-87 23 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Cytotoxicity
Tumors
Cells

Chemotherapy for temporal bone cancer

Ferrarotto, R. & Kies, M. S., May 3 2018, Temporal Bone Cancer. Springer International Publishing, p. 403-410 8 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Bone Neoplasms
Temporal Bone
Drug Therapy

Chronic lymphocytic leukemias

Wierda, W. G. & O'Brien, S. M., Nov 16 2018, DeVita, Hellman, and Rosenberg's Cancer: Principles & Practice of Oncology. Wolters Kluwer Health Pharma Solutions (Europe) Ltd, p. 1785-1801 17 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

B-Cell Chronic Lymphocytic Leukemia

Clinical decision-making in pancreaticcancer

Wolff, R. A., Apr 11 2018, Pancreatic Cancer. Springer New York, p. 601-632 32 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Pancreatic Neoplasms
Patient Care Planning
Neoadjuvant Therapy
Caregivers
Therapeutics

Cognitive outcomes of patients with traumatic bifrontal contusions

Wong, G. K. C., Ngai, K., Poon, W., Zheng, V. Z. Y. & Yu, C., Jan 1 2018, Acta Neurochirurgica, Supplementum. Springer-Verlag Wien, p. 63-65 3 p. (Acta Neurochirurgica, Supplementum; vol. 126).

Research output: Chapter in Book/Report/Conference proceedingChapter

Contusions
Social Adjustment
Glasgow Coma Scale
Craniotomy
Neuropsychological Tests

Comparative metagenomics

Maltez Thomas, A., Prata Lima, F., Maria Silva Moura, L., Maria da Silva, A., Dias-Neto, E. & Setubal, J. C., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 243-260 18 p. (Methods in Molecular Biology; vol. 1704).

Research output: Chapter in Book/Report/Conference proceedingChapter

Metagenome
Metagenomics
DNA Sequence Analysis
16S Ribosomal RNA
Microbiota

Complementary therapies in cancer rehabilitation and symptom management

Lopez, G. & Gutierrez, C., Jan 1 2018, Cancer Rehabilitation: Principles and Practice, Second Edition. Springer Publishing Company, p. 935-939 5 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Complementary Therapies
Rehabilitation
Neoplasms

Comprehensive HLA typing from a current allele database using next-generation sequencing data

Kawaguchi, S., Higasa, K., Yamada, R. & Matsuda, F., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 225-233 9 p. (Methods in Molecular Biology; vol. 1802).

Research output: Chapter in Book/Report/Conference proceedingChapter

Histocompatibility Testing
Alleles
Databases
Donor Selection
Regenerative Medicine
1 Citation (Scopus)

Computational identification of cross-talking ceRNAs

Li, Y., Huo, C., Lin, X. & Xu, J., Jan 1 2018, Advances in Experimental Medicine and Biology. Springer New York LLC, p. 97-108 12 p. (Advances in Experimental Medicine and Biology; vol. 1094).

Research output: Chapter in Book/Report/Conference proceedingChapter

RNA
Computational methods
MicroRNAs
Long Noncoding RNA
Untranslated RNA

Cytopenias: Acquired bone marrow failure

Wang, S., Jun 4 2018, Diagnosis of Blood and Bone Marrow Disorders. Springer International Publishing, p. 119-134 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Bone Marrow

Cytopenias: Reactive and neoplastic

Loghavi, S. & Hasserjian, R. P., Jun 4 2018, Diagnosis of Blood and Bone Marrow Disorders. Springer International Publishing, p. 17-79 63 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Detection of migrasomes

Chen, Y., Li, Y., Ma, L. & Yu, L., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 43-49 7 p. (Methods in Molecular Biology; vol. 1749).

Research output: Chapter in Book/Report/Conference proceedingChapter

Organelles
Fluorescence Microscopy
Electron Microscopy
Membranes
Extracellular Vesicles

Diagnostic imaging of temporal bone cancer

Debnam, J. M., May 3 2018, Temporal Bone Cancer. Springer International Publishing, p. 29-43 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Bone Neoplasms
Temporal Bone
Diagnostic Imaging